myRT

myRT report for GCA_013620865.1_ASM1362086v1

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Seq: NXBO01000021.1 Klebsiella pneumoniae subsp. pneumoniae strain H49 NODE_21_length_72178_cov_52.9571, whole genome shotgun sequence (72178 bp)
Overview 1 RT 1: 756-7609 bp Neighborhood of RT #1 [756, 7626] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 756-1421 bp Feature: domain Description: INT_P4_C Location: 861-1419 bp Feature: domain Description: INT_P4_C Location: 861 -1 41 9 bp Feature: gene Location: 1682-2122 bp Feature: domain Description: Integrase_1 Location: 1688-1904 bp Feature: domain Description: Integrase_1 Location: 1 688-1 904 bp Feature: gene Location: 2179-4257 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2587-3031 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2587-3031 bp Feature: gene Location: 4257-6866 bp Feature: domain Description: FimD Location: 4314-6855 bp Feature: domain Description: FimD Location: 431 4-6855 bp Feature: gene Location: 6898-7626 bp Feature: domain Description: FimC Location: 6946-7609 bp Feature: domain Description: FimC Location: 6946-7609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NXBO01000026.1 Klebsiella pneumoniae subsp. pneumoniae strain H49 NODE_26_length_34866_cov_55.7298, whole genome shotgun sequence (34866 bp)
Overview 1 RT 1: 17607-20791 bp Neighborhood of RT #1 [17607, 20791] PRK10276 RVT-GII Feature: gene Location: 17607-18032 bp Feature: domain Description: PRK10276 Location: 17610-18018 bp Feature: domain Description: PRK102 76 Location: 17610-18018 bp Feature: gene Location: 18150-18383 bp Feature: gene Location: 18434-19945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18839-19553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18839-19553 bp Feature: gene Location: 20179-20409 bp Feature: gene Location: 20468-20791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII