myRT

myRT report for GCA_013620905.1_ASM1362090v1

Download annotations/find similar RTs

Seq: NXBI01000015.1 Klebsiella pneumoniae subsp. pneumoniae strain 44 NODE_15, whole genome shotgun sequence (146445 bp)
Overview 1 RT 1: 32024-38877 bp Neighborhood of RT #1 [32024, 38894] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32024-32689 bp Feature: domain Description: INT_P4_C Location: 32129-32687 bp Feature: domain Description: INT_P4_C Location: 321 29-32687 bp Feature: gene Location: 32950-33390 bp Feature: domain Description: Integrase_1 Location: 32956-33172 bp Feature: domain Description: Integrase_1 Location: 32956-331 72 bp Feature: gene Location: 33447-35525 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33855-34299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33855-34299 bp Feature: gene Location: 35525-38134 bp Feature: domain Description: FimD Location: 35582-38123 bp Feature: domain Description: FimD Location: 35582-381 23 bp Feature: gene Location: 38166-38894 bp Feature: domain Description: FimC Location: 38214-38877 bp Feature: domain Description: FimC Location: 3821 4-38877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NXBI01000017.1 Klebsiella pneumoniae subsp. pneumoniae strain 44 NODE_17, whole genome shotgun sequence (126028 bp)
Overview 1 RT 1: 122568-125930 bp Neighborhood of RT #1 [122568, 125930] PRK10276 RVT-GII Feature: gene Location: 122568-122885 bp Feature: domain Description: PRK10276 Location: 122574-122688 bp Feature: domain Description: PRK102 76 Location: 12 2 574-12 2 688 bp Feature: gene Location: 122885-123124 bp Feature: gene Location: 123202-124686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123604-124294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 3604-12 42 94 bp Feature: gene Location: 124740-124886 bp Feature: gene Location: 125178-125930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII