myRT

myRT report for GCA_013620925.1_ASM1362092v1

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Seq: NXBJ01000017.1 Klebsiella pneumoniae subsp. pneumoniae strain C1693 NODE_17_length_132591_cov_46.4657_ID_7038, whole genome shotgun sequence (132591 bp)
Overview 1 RT 1: 18170-25023 bp Neighborhood of RT #1 [18170, 25040] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 18170-18835 bp Feature: domain Description: INT_P4_C Location: 18275-18833 bp Feature: domain Description: INT_P4_C Location: 1 8275-1 8833 bp Feature: gene Location: 19096-19536 bp Feature: domain Description: Integrase_1 Location: 19102-19318 bp Feature: domain Description: Integrase_1 Location: 1 91 02-1 931 8 bp Feature: gene Location: 19593-21671 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 20001-20445 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 20001 -20445 bp Feature: gene Location: 21671-24280 bp Feature: domain Description: FimD Location: 21728-24269 bp Feature: domain Description: FimD Location: 21 728-24269 bp Feature: gene Location: 24312-25040 bp Feature: domain Description: FimC Location: 24360-25023 bp Feature: domain Description: FimC Location: 24360-25023 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NXBJ01000023.1 Klebsiella pneumoniae subsp. pneumoniae strain C1693 NODE_23_length_86778_cov_42.5277_ID_7050, whole genome shotgun sequence (86778 bp)
Overview 1 RT 1: 81976-85338 bp Neighborhood of RT #1 [81976, 85338] PRK10276 RVT-GII Feature: gene Location: 81976-82293 bp Feature: domain Description: PRK10276 Location: 81982-82096 bp Feature: domain Description: PRK102 76 Location: 81982 -82 096 bp Feature: gene Location: 82293-82532 bp Feature: gene Location: 82610-84094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83012-83702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83012 -83702 bp Feature: gene Location: 84148-84294 bp Feature: gene Location: 84586-85338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII