myRT

myRT report for GCA_013626005.1_ASM1362600v1

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Seq: JABXNG010000015.1 Listeria monocytogenes strain 2013L-5444 NODE_3_length_421194_cov_80.2388_ID_5, whole genome shotgun sequence (421194 bp)
Overview 1 RT 1: 2183-7746 bp 2 RT 2: 304808-308632 bp Neighborhood of RT #1 [2183, 7746] SpoT Cah RVT-Retrons HipB ImmA Neighborhood of RT #2 [304808, 308637] RpmF Arsenite_oxidase RVT-AbiP2 PRK13316 YdeE Feature: gene Location: 2183-2725 bp Feature: domain Description: SpoT Location: 2189-2714 bp Feature: domain Description: SpoT Location: 21 89-271 4 bp Feature: gene Location: 2793-3530 bp Feature: domain Description: Cah Location: 2838-3525 bp Feature: domain Description: Cah Location: 2838-3525 bp Feature: gene Location: 3658-5349 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3784-4384 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3784-4384 bp Feature: gene Location: 5771-6952 bp Feature: domain Description: HipB Location: 5780-6086 bp Feature: domain Description: HipB Location: 5780-6086 bp Feature: domain Description: ImmA Location: 6194-6791 bp Feature: domain Description: ImmA Location: 61 94-6791 bp Feature: gene Location: 6985-7746 bp Feature: gene Location: 304808-304978 bp Feature: domain Description: RpmF Location: 304811-304976 bp Feature: domain Description: RpmF Location: 30481 1 -304976 bp Feature: gene Location: 305043-305618 bp Feature: domain Description: Arsenite_oxidase Location: 305055-305544 bp Feature: domain Description: Arsenite_oxidase Location: 305055-305544 bp Feature: gene Location: 305847-307427 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 306111-306570 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3061 1 1 -306570 bp Feature: gene Location: 307635-308000 bp Feature: domain Description: PRK13316 Location: 307638-307998 bp Feature: domain Description: PRK1 331 6 Location: 307638-307998 bp Feature: gene Location: 308158-308637 bp Feature: domain Description: YdeE Location: 308161-308632 bp Feature: domain Description: YdeE Location: 3081 61 -308632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoT (COG0317), Cah (COG3338), RVT-Retrons, HipB (COG1396), ImmA (COG2856), RpmF (COG0333), Arsenite_oxidase, RVT-AbiP2, PRK13316 (heme oxygenase IsdG), YdeE (COG3708)