myRT

myRT report for GCA_013694025.1_ASM1369402v1

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Seq: JACEFH010000016.1 Bacteroides fragilis strain BFR_KZ04 NODE_16_length_87302_cov_16.156455, whole genome shotgun sequence (87302 bp)
Overview 1 RT 1: 61030-69994 bp Neighborhood of RT #1 [61030, 69996] RNase_Z rpsA RVT-Retrons GlnA3 Feature: gene Location: 61030-61944 bp Feature: domain Description: RNase_Z Location: 61045-61936 bp Feature: domain Description: RNase_Z Location: 61 045-61 936 bp Feature: gene Location: 62094-63887 bp Feature: domain Description: rpsA Location: 62172-63780 bp Feature: domain Description: rpsA Location: 621 72-63780 bp Feature: gene Location: 64029-65141 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 64344-64893 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 64344-64893 bp Feature: gene Location: 65348-67567 bp Feature: gene Location: 67807-69996 bp Feature: domain Description: GlnA3 Location: 67882-69994 bp Feature: domain Description: GlnA3 Location: 67882-69994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_Z (TIGR02651), rpsA (TIGR00717), RVT-Retrons, GlnA3 (COG3968)

Seq: JACEFH010000003.1 Bacteroides fragilis strain BFR_KZ04 NODE_3_length_143195_cov_24.508989, whole genome shotgun sequence (143195 bp)
Overview 1 RT 1: 120022-125979 bp Neighborhood of RT #1 [120022, 126056] PRK05182 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Bac_Flav_CT_G DUF4133 Feature: gene Location: 120022-120432 bp Feature: domain Description: PRK05182 Location: 120088-120241 bp Feature: domain Description: PRK05182 Location: 12 0088-12 02 41 bp Feature: gene Location: 120456-120989 bp Feature: domain Description: Bac_Flav_CT_G Location: 120474-120870 bp Feature: domain Description: Bac_Flav_CT_G Location: 12 0474-12 0870 bp Feature: gene Location: 121067-122878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121331-122153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 1331-12 2 153 bp Feature: domain Description: Intron_maturas2 Location: 122228-122555 bp Feature: domain Description: Intron_maturas2 Location: 12 2 2 2 8-12 2 555 bp Feature: domain Description: HNHc Note: nucleases Location: 122687-122849 bp Feature: domain Description: HNHc Note: nucleases Location: 12 2 687-12 2 849 bp Feature: gene Location: 123428-125653 bp Feature: domain Description: Bac_Flav_CT_G Location: 123575-125081 bp Feature: domain Description: Bac_Flav_CT_G Location: 12 3575-12 5081 bp Feature: domain Description: Bac_Flav_CT_G Location: 125189-125639 bp Feature: domain Description: Bac_Flav_CT_G Location: 12 5189-12 5639 bp Feature: gene Location: 125760-126056 bp Feature: domain Description: DUF4133 Location: 125802-125979 bp Feature: domain Description: DUF4133 Location: 12 5802 -12 5979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05182 (DNA-directed RNA polymerase subunit alpha; Provisional), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4133 (pfam13571)

Seq: JACEFH010000047.1 Bacteroides fragilis strain BFR_KZ04 NODE_47_length_29050_cov_10.483906, whole genome shotgun sequence (29050 bp)
Overview 1 RT 1: 21327-26054 bp Neighborhood of RT #1 [21327, 26054] YurZ QdoI PRK07116 RVT-CRISPR-like Feature: gene Location: 21327-22145 bp Feature: domain Description: YurZ Location: 21402-21714 bp Feature: domain Description: YurZ Location: 21402-21714 bp Feature: domain Description: QdoI Location: 21792-22113 bp Feature: domain Description: QdoI Location: 21792-22113 bp Feature: gene Location: 22159-22728 bp Feature: domain Description: PRK07116 Location: 22255-22723 bp Feature: domain Description: PRK07116 Location: 22255-22723 bp Feature: gene Location: 23138-24343 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 23324-23987 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 23 3 24-23 987 bp Feature: gene Location: 24467-25762 bp Feature: gene Location: 25752-26054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YurZ (COG0599), QdoI (COG1917), PRK07116 (flavodoxin; Provisional), RVT-CRISPR