myRT

myRT report for GCA_013694115.1_ASM1369411v1

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Seq: JACEFV010000001.1 Escherichia coli strain 17-2 1, whole genome shotgun sequence (2537289 bp)
Overview 1 RT 1: 870407-875500 bp Neighborhood of RT #1 [870407, 875502] HTH_38 Tra8 PHA02517 RVT-GII GIIM PHA02517 PHA02517 Feature: gene Location: 870407-871558 bp Feature: domain Description: HTH_38 Location: 870416-870530 bp Feature: domain Description: HTH_38 Location: 87041 6-870530 bp Feature: domain Description: Tra8 Location: 870566-871547 bp Feature: domain Description: Tra8 Location: 870566-871 547 bp Feature: gene Location: 871689-872114 bp Feature: domain Description: PHA02517 Location: 871713-872049 bp Feature: domain Description: PHA0251 7 Location: 871 71 3-872049 bp Feature: gene Location: 872706-874229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872979-873711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872979-87371 1 bp Feature: domain Description: GIIM Note: maturase Location: 873786-873984 bp Feature: domain Description: GIIM Note: maturase Location: 873786-873984 bp Feature: gene Location: 874394-874552 bp Feature: domain Description: PHA02517 Location: 874397-874517 bp Feature: domain Description: PHA0251 7 Location: 874397-87451 7 bp Feature: gene Location: 874615-875502 bp Feature: domain Description: PHA02517 Location: 874675-875500 bp Feature: domain Description: PHA0251 7 Location: 874675-875500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JACEFV010000004.1 Escherichia coli strain 17-2 4, whole genome shotgun sequence (81082 bp)
Overview 1 RT 1: 46336-49483 bp Neighborhood of RT #1 [46336, 49488] PRK09413 RVT-GII GIIM PinE Feature: gene Location: 46336-46500 bp Feature: gene Location: 46511-46708 bp Feature: domain Description: PRK09413 Location: 46514-46676 bp Feature: domain Description: PRK09413 Location: 46514-46676 bp Feature: gene Location: 47184-48536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47505-48123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47505-4812 3 bp Feature: domain Description: GIIM Note: maturase Location: 48171-48402 bp Feature: domain Description: GIIM Note: maturase Location: 48171-48402 bp Feature: gene Location: 48745-49146 bp Feature: gene Location: 49246-49488 bp Feature: domain Description: PinE Location: 49249-49483 bp Feature: domain Description: PinE Location: 492 49-49483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII, GIIM (pfam08388), PinE (COG1961)