myRT

myRT report for GCA_013695005.1_ASM1369500v1

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Seq: JACDBJ010000274.1 Pseudonocardiales bacterium isolate MGR_bin279 SD2897-2912_k127_176868, whole genome shotgun sequence (2811 bp)
Overview 1 RT 1: 1-2762 bp Neighborhood of RT #1 [1, 2809] RVT-GII GIIM DDE_3 Feature: gene Location: 1-165 bp Feature: gene Location: 676-2235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1051-1738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 051 -1 738 bp Feature: domain Description: GIIM Note: maturase Location: 1813-2032 bp Feature: domain Description: GIIM Note: maturase Location: 1 81 3-2032 bp Feature: gene Location: 2393-2809 bp Feature: domain Description: DDE_3 Location: 2402-2762 bp Feature: domain Description: DDE_3 Location: 2402-2762 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388)

Seq: JACDBJ010000026.1 Pseudonocardiales bacterium isolate MGR_bin279 SD2897-2912_k127_1864671, whole genome shotgun sequence (2196 bp)
Overview 1 RT 1: 3-2181 bp Neighborhood of RT #1 [3, 2195] Transposase_mut RVT-GII GIIM Feature: gene Location: 3-341 bp Feature: domain Description: Transposase_mut Location: 15-273 bp Feature: domain Description: Transposase_mut Location: 15-2 73 bp Feature: gene Location: 894-2195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1215-1902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 15-1902 bp Feature: domain Description: GIIM Note: maturase Location: 1971-2181 bp Feature: domain Description: GIIM Note: maturase Location: 1971-2 181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), RVT-GII, GIIM (pfam08388)

Seq: JACDBJ010000381.1 Pseudonocardiales bacterium isolate MGR_bin279 SD2897-2912_k127_3498469, whole genome shotgun sequence (6319 bp)
Overview 1 RT 1: 307-3165 bp Neighborhood of RT #1 [307, 3165] RVT-GII GIIM Feature: gene Location: 307-1752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 622-1309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 622-13 09 bp Feature: domain Description: GIIM Note: maturase Location: 1384-1582 bp Feature: domain Description: GIIM Note: maturase Location: 13 84-1582 bp Feature: gene Location: 2378-2842 bp Feature: gene Location: 2833-3165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACDBJ010000045.1 Pseudonocardiales bacterium isolate MGR_bin279 SD2897-2912_k127_8819122, whole genome shotgun sequence (2510 bp)
Overview 1 RT 1: 3-2493 bp Neighborhood of RT #1 [3, 2507] HTH_23 HTH_23 DDE_3 RVT_N RVT-GII Feature: gene Location: 3-203 bp Feature: gene Location: 271-1278 bp Feature: domain Description: HTH_23 Location: 358-490 bp Feature: domain Description: HTH_23 Location: 358-4 90 bp Feature: domain Description: HTH_23 Location: 604-685 bp Feature: domain Description: HTH_23 Location: 604 -685 bp Feature: domain Description: DDE_3 Location: 790-1156 bp Feature: domain Description: DDE_3 Location: 790-1156 bp Feature: gene Location: 1836-2507 bp Feature: RT Description: RVT_N Location: 1911-2151 bp Feature: RT Description: RVT_N Location: 1911-2151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2208-2493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2208-24 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, HTH_23 (pfam13384), DDE_3 (pfam13358)