myRT

myRT report for GCA_013697045.1_ASM1369704v1

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Seq: JACCXJ010000379.1 Gammaproteobacteria bacterium isolate MGR_bin175 SD2897-2912_k127_1263205, whole genome shotgun sequence (12779 bp)
Overview 1 RT 1: 1-2385 bp Neighborhood of RT #1 [1, 2423] RVT-GII YceD RpmF Feature: gene Location: 1-579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 -568 bp Feature: gene Location: 1509-2138 bp Feature: domain Description: YceD Location: 1650-2118 bp Feature: domain Description: YceD Location: 1 650-21 1 8 bp Feature: gene Location: 2226-2423 bp Feature: domain Description: RpmF Location: 2229-2385 bp Feature: domain Description: RpmF Location: 2229-2385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YceD (COG1399), RVT-GII, RpmF (COG0333)

Seq: JACCXJ010000083.1 Gammaproteobacteria bacterium isolate MGR_bin175 SD2897-2912_k127_1890015, whole genome shotgun sequence (12742 bp)
Overview 1 RT 1: 1574-9331 bp Neighborhood of RT #1 [1574, 9471] COG5635 COG5635 YfmG Avd_like RVT-DGRs pfam03781 COG5635 Feature: gene Location: 1574-4438 bp Feature: domain Description: COG5635 Location: 2039-2132 bp Feature: domain Description: COG5635 Location: 2 039-2 132 bp Feature: domain Description: COG5635 Location: 2414-3278 bp Feature: domain Description: COG5635 Location: 2 414-32 78 bp Feature: domain Description: YfmG Location: 3599-4412 bp Feature: domain Description: YfmG Location: 3599-4412 bp Feature: gene Location: 4976-5380 bp Feature: domain Description: Avd_like Location: 5003-5315 bp Feature: domain Description: Avd_like Location: 5003-5315 bp Feature: gene Location: 5427-6521 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5625-6273 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 562 5-62 73 bp Feature: gene Location: 6592-7533 bp Feature: domain Description: pfam03781 Location: 6877-7504 bp Feature: domain Description: pfam03781 Location: 6877-7504 bp Feature: gene Location: 7813-9471 bp Feature: domain Description: COG5635 Location: 8365-9331 bp Feature: domain Description: COG5635 Location: 8365-9331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5635 (Predicted NTPase, NACHT family domain ), YfmG (COG1262), Avd_like (cd16376), RVT-DGRs, pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: JACCXJ010000291.1 Gammaproteobacteria bacterium isolate MGR_bin175 SD2897-2912_k127_4817463, whole genome shotgun sequence (8117 bp)
Overview 1 RT 1: 2726-5259 bp Neighborhood of RT #1 [2726, 5259] RVT-GII Feature: gene Location: 2726-2923 bp Feature: gene Location: 2939-3214 bp Feature: gene Location: 3569-3817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3677-3797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 677-3 797 bp Feature: gene Location: 4465-4614 bp Feature: gene Location: 5092-5259 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACCXJ010000251.1 Gammaproteobacteria bacterium isolate MGR_bin175 SD2897-2912_k127_8488196, whole genome shotgun sequence (31094 bp)
Overview 1 RT 1: 1-4143 bp Neighborhood of RT #1 [1, 4143] Avd_like RVT-DGRs RVT-DGRs PRK04375 Feature: gene Location: 1-450 bp Feature: domain Description: Avd_like Location: 256-388 bp Feature: domain Description: Avd_like Location: 256-388 bp Feature: gene Location: 731-1396 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 923-1232 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 923-1232 bp Feature: gene Location: 1222-2325 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1339-1612 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1339-1612 bp Feature: gene Location: 2525-3433 bp Feature: domain Description: PRK04375 Location: 2561-3416 bp Feature: domain Description: PRK04 375 Location: 2561-34 16 bp Feature: gene Location: 3463-4143 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, PRK04375 (protoheme IX farnesyltransferase; Provisional), Avd_like (cd16376)