myRT

myRT report for GCA_013698215.1_ASM1369821v1

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Seq: JACCVJ010000257.1 Tatlockia sp. isolate MGR_bin123 SD2897-2912_k127_1002658, whole genome shotgun sequence (2072 bp)
Overview 1 RT 1: 2-1894 bp Neighborhood of RT #1 [2, 1992] WbqC RVT-GII GIIM Feature: gene Location: 2-148 bp Feature: domain Description: WbqC Location: 8-95 bp Feature: domain Description: WbqC Location: 8-95 bp Feature: gene Location: 451-660 bp Feature: gene Location: 733-1992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 946-1603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 946-1 603 bp Feature: domain Description: GIIM Note: maturase Location: 1693-1894 bp Feature: domain Description: GIIM Note: maturase Location: 1 693-1 894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WbqC (pfam08889), RVT-GII, GIIM (pfam08388)

Seq: JACCVJ010000644.1 Tatlockia sp. isolate MGR_bin123 SD2897-2912_k127_1747942, whole genome shotgun sequence (2278 bp)
Overview 1 RT 1: 497-2046 bp Neighborhood of RT #1 [497, 2069] RVT_N RVT-GII McrA Feature: gene Location: 497-1483 bp Feature: RT Description: RVT_N Location: 533-779 bp Feature: RT Description: RVT_N Location: 533-779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 830-1445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 830-1445 bp Feature: gene Location: 1521-2069 bp Feature: domain Description: McrA Location: 1710-2046 bp Feature: domain Description: McrA Location: 1710-2 046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrA (COG4058), RVT_N (pfam13655), RVT-GII

Seq: JACCVJ010000661.1 Tatlockia sp. isolate MGR_bin123 SD2897-2912_k127_1780961, whole genome shotgun sequence (6294 bp)
Overview 1 RT 1: 2-6291 bp Neighborhood of RT #1 [2, 6291] RVT-GII GIIM McrA GIIM HNHc RVT_N RVT-GII GIIM HNHc RVT_N RVT-GII Feature: gene Location: 2-1243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-497 bp Feature: domain Description: GIIM Note: maturase Location: 596-827 bp Feature: domain Description: GIIM Note: maturase Location: 596-827 bp Feature: domain Description: McrA Location: 920-1190 bp Feature: domain Description: McrA Location: 920-1190 bp Feature: gene Location: 1261-1419 bp Feature: gene Location: 1422-2036 bp Feature: domain Description: GIIM Note: maturase Location: 1434-1629 bp Feature: domain Description: GIIM Note: maturase Location: 143 4-1629 bp Feature: domain Description: HNHc Note: nucleases Location: 1863-2013 bp Feature: domain Description: HNHc Note: nucleases Location: 1863 -2013 bp Feature: gene Location: 2305-4002 bp Feature: RT Description: RVT_N Location: 2347-2593 bp Feature: RT Description: RVT_N Location: 23 47-2593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2641-3280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2641-3 280 bp Feature: domain Description: GIIM Note: maturase Location: 3352-3586 bp Feature: domain Description: GIIM Note: maturase Location: 3 3 52-3 586 bp Feature: domain Description: HNHc Note: nucleases Location: 3778-3952 bp Feature: domain Description: HNHc Note: nucleases Location: 3 778-3 952 bp Feature: gene Location: 4575-5474 bp Feature: RT Description: RVT_N Location: 4623-4866 bp Feature: RT Description: RVT_N Location: 4623 -4866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4914-5448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4914-5448 bp Feature: gene Location: 6157-6291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNHc (smart00507), RVT-GII, McrA (COG4058), RVT_N (pfam13655)

Seq: JACCVJ010000531.1 Tatlockia sp. isolate MGR_bin123 SD2897-2912_k127_2541644, whole genome shotgun sequence (4568 bp)
Overview 1 RT 1: 1663-4454 bp Neighborhood of RT #1 [1663, 4480] nifR3_yhdG RVT_N RVT-GII Feature: gene Location: 1663-2718 bp Feature: domain Description: nifR3_yhdG Location: 1723-2665 bp Feature: domain Description: nifR3_yhdG Location: 1723-2665 bp Feature: gene Location: 3160-3297 bp Feature: gene Location: 3635-4480 bp Feature: RT Description: RVT_N Location: 3686-3926 bp Feature: RT Description: RVT_N Location: 3686-3926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3971-4454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3971-4 4 54 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nifR3_yhdG (TIGR00737), RVT_N (pfam13655), RVT-GII

Seq: JACCVJ010000624.1 Tatlockia sp. isolate MGR_bin123 SD2897-2912_k127_4029534, whole genome shotgun sequence (2293 bp)
Overview 1 RT 1: 3-2182 bp Neighborhood of RT #1 [3, 2211] RVT_N RVT-GII YkfC HNHc Feature: gene Location: 3-242 bp Feature: gene Location: 565-2211 bp Feature: RT Description: RVT_N Location: 616-859 bp Feature: RT Description: RVT_N Location: 616-85 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901-1513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901-15 13 bp Feature: domain Description: YkfC Location: 1693-1819 bp Feature: domain Description: YkfC Location: 1693-1819 bp Feature: domain Description: HNHc Note: nucleases Location: 2017-2182 bp Feature: domain Description: HNHc Note: nucleases Location: 2017-2182 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)

Seq: JACCVJ010000495.1 Tatlockia sp. isolate MGR_bin123 SD2897-2912_k127_4356260, whole genome shotgun sequence (2313 bp)
Overview 1 RT 1: 533-2197 bp Neighborhood of RT #1 [533, 2235] RVT_N RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 533-1258 bp Feature: RT Description: RVT_N Location: 581-821 bp Feature: RT Description: RVT_N Location: 581-821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872-1235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872-1235 bp Feature: gene Location: 1354-2235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1360-1528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136 0-1528 bp Feature: domain Description: GIIM Note: maturase Location: 1585-1813 bp Feature: domain Description: GIIM Note: maturase Location: 1585-1813 bp Feature: domain Description: HNHc Note: nucleases Location: 2035-2197 bp Feature: domain Description: HNHc Note: nucleases Location: 2035-2197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655)

Seq: JACCVJ010000425.1 Tatlockia sp. isolate MGR_bin123 SD2897-2912_k127_4776647, whole genome shotgun sequence (3478 bp)
Overview 1 RT 1: 2-2713 bp Neighborhood of RT #1 [2, 2904] RVT_N RVT-GII GIIM McrA HTH_3 Feature: gene Location: 2-1768 bp Feature: RT Description: RVT_N Location: 35-275 bp Feature: RT Description: RVT_N Location: 35-27 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323-1016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 323-1016 bp Feature: domain Description: GIIM Note: maturase Location: 1121-1352 bp Feature: domain Description: GIIM Note: maturase Location: 1121-1352 bp Feature: domain Description: McrA Location: 1445-1715 bp Feature: domain Description: McrA Location: 1445-17 15 bp Feature: gene Location: 1991-2170 bp Feature: gene Location: 2497-2904 bp Feature: domain Description: HTH_3 Location: 2554-2713 bp Feature: domain Description: HTH_3 Location: 2554-27 13 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), HTH_3 (pfam01381)

Seq: JACCVJ010000230.1 Tatlockia sp. isolate MGR_bin123 SD2897-2912_k127_528222, whole genome shotgun sequence (3281 bp)
Overview 1 RT 1: 285-1871 bp Neighborhood of RT #1 [285, 1885] RVT_N RVT-GII FRQ1 Feature: gene Location: 285-875 bp Feature: RT Description: RVT_N Location: 321-567 bp Feature: RT Description: RVT_N Location: 321-567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 618-849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 618 -8 49 bp Feature: gene Location: 1258-1545 bp Feature: gene Location: 1652-1885 bp Feature: domain Description: FRQ1 Location: 1658-1871 bp Feature: domain Description: FRQ1 Location: 1658 -18 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FRQ1 (COG5126), RVT_N (pfam13655), RVT-GII

Seq: JACCVJ010000641.1 Tatlockia sp. isolate MGR_bin123 SD2897-2912_k127_7311997, whole genome shotgun sequence (2485 bp)
Overview 1 RT 1: 108-2417 bp Neighborhood of RT #1 [108, 2417] RVT_N RVT-GII GIIM McrA Feature: gene Location: 108-1676 bp Feature: RT Description: RVT_N Location: 141-387 bp Feature: RT Description: RVT_N Location: 141-387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-1083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-1083 bp Feature: domain Description: GIIM Note: maturase Location: 1140-1323 bp Feature: domain Description: GIIM Note: maturase Location: 1140-1323 bp Feature: domain Description: McrA Location: 1398-1638 bp Feature: domain Description: McrA Location: 139 8-1638 bp Feature: gene Location: 2229-2417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JACCVJ010000251.1 Tatlockia sp. isolate MGR_bin123 SD2897-2912_k127_8403994, whole genome shotgun sequence (2511 bp)
Overview 1 RT 1: 246-2282 bp Neighborhood of RT #1 [246, 2282] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 246-1886 bp Feature: RT Description: RVT_N Location: 297-540 bp Feature: RT Description: RVT_N Location: 297-540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 582-1200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 582-1200 bp Feature: domain Description: GIIM Note: maturase Location: 1263-1485 bp Feature: domain Description: GIIM Note: maturase Location: 1263-1485 bp Feature: domain Description: HNHc Note: nucleases Location: 1710-1863 bp Feature: domain Description: HNHc Note: nucleases Location: 1710 -1863 bp Feature: gene Location: 2004-2282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JACCVJ010000549.1 Tatlockia sp. isolate MGR_bin123 SD2897-2912_k127_8576316, whole genome shotgun sequence (2601 bp)
Overview 1 RT 1: 158-2569 bp Neighborhood of RT #1 [158, 2598] RVT-GII McrA RVT_N RVT-GII HNHc Feature: gene Location: 158-1129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164-536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164-536 bp Feature: domain Description: McrA Location: 761-1103 bp Feature: domain Description: McrA Location: 761-11 03 bp Feature: gene Location: 1143-1661 bp Feature: RT Description: RVT_N Location: 1149-1359 bp Feature: RT Description: RVT_N Location: 11 49-1359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1410-1650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1410-1650 bp Feature: gene Location: 2425-2598 bp Feature: domain Description: HNHc Note: nucleases Location: 2431-2569 bp Feature: domain Description: HNHc Note: nucleases Location: 2431-2569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058), HNHc (smart00507)