myRT

myRT report for GCA_013791645.1_ASM1379164v1

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Seq: VMTL01000315.1 Anaerolineae bacterium isolate N3_21 k141_272676, whole genome shotgun sequence (7377 bp)
Overview 1 RT 1: 3-7371 bp Neighborhood of RT #1 [3, 7376] dCache_1 Tar Tar RVT-GII GIIM ATH1 UgpE Feature: gene Location: 3-2342 bp Feature: domain Description: dCache_1 Location: 153-846 bp Feature: domain Description: dCache_1 Location: 1 53-846 bp Feature: domain Description: Tar Location: 852-1131 bp Feature: domain Description: Tar Location: 852-1 1 31 bp Feature: domain Description: Tar Location: 1425-2169 bp Feature: domain Description: Tar Location: 1 425-21 69 bp Feature: gene Location: 2692-4188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3127-3745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 27-3745 bp Feature: domain Description: GIIM Note: maturase Location: 3799-4015 bp Feature: domain Description: GIIM Note: maturase Location: 3799-401 5 bp Feature: gene Location: 4549-6885 bp Feature: domain Description: ATH1 Location: 4582-6874 bp Feature: domain Description: ATH1 Location: 4582-6874 bp Feature: gene Location: 7053-7376 bp Feature: domain Description: UgpE Location: 7059-7371 bp Feature: domain Description: UgpE Location: 7059-7371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dCache_1 (pfam02743), Tar (COG0840), RVT-GII, GIIM (pfam08388), ATH1 (COG1554), UgpE (COG0395)

Seq: VMTL01000243.1 Anaerolineae bacterium isolate N3_21 k141_91485, whole genome shotgun sequence (2896 bp)
Overview 1 RT 1: 3-2848 bp Neighborhood of RT #1 [3, 2877] RVT-UG9 M42_glucanase_like FadM Feature: gene Location: 3-1304 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 9-480 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 9-480 bp Feature: gene Location: 1367-2413 bp Feature: domain Description: M42_glucanase_like Location: 1409-2405 bp Feature: domain Description: M42 _glucanase_like Location: 1409-2 405 bp Feature: gene Location: 2416-2877 bp Feature: domain Description: FadM Location: 2446-2848 bp Feature: domain Description: FadM Location: 2 446-2 848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG9, M42_glucanase_like (cd05657), FadM (COG0824)