myRT

myRT report for GCA_013791765.1_ASM1379176v1

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Seq: VMTC01000107.1 Rhodoferax sp. isolate S3_26 k141_134841, whole genome shotgun sequence (158700 bp)
Overview 1 RT 1: 56452-63679 bp Neighborhood of RT #1 [56452, 63744] acyl_WS_DGAT PRK11823 RVT-GII MarR_2 recA Feature: gene Location: 56452-57855 bp Feature: domain Description: acyl_WS_DGAT Location: 56464-57829 bp Feature: domain Description: acyl_WS_DGAT Location: 56464-57829 bp Feature: gene Location: 58082-59458 bp Feature: domain Description: PRK11823 Location: 58085-59450 bp Feature: domain Description: PRK1 1 823 Location: 58085-59450 bp Feature: gene Location: 60547-61662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61048-61558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 048-61 558 bp Feature: gene Location: 61957-62496 bp Feature: domain Description: MarR_2 Location: 62188-62350 bp Feature: domain Description: MarR_2 Location: 621 88-62350 bp Feature: gene Location: 62653-63744 bp Feature: domain Description: recA Location: 62698-63679 bp Feature: domain Description: recA Location: 62698-63679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT acyl_WS_DGAT (TIGR02946), PRK11823 (DNA repair protein RadA; Provisional), RVT-GII, MarR_2 (pfam12802), recA (PRK09519)

Seq: VMTC01000086.1 Rhodoferax sp. isolate S3_26 k141_18462, whole genome shotgun sequence (37879 bp)
Overview 1 RT 1: 30857-35221 bp Neighborhood of RT #1 [30857, 35274] CBS_pair_CA... RVT-GII GIIM XerD Feature: gene Location: 30857-32101 bp Feature: gene Location: 32220-32615 bp Feature: domain Description: CBS_pair_CA... Location: 32235-32559 bp Feature: domain Description: CBS_pair_CA... Location: 32 2 35-32 559 bp Feature: gene Location: 32932-34026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33040-33661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33040-33661 bp Feature: domain Description: GIIM Note: maturase Location: 33709-33919 bp Feature: domain Description: GIIM Note: maturase Location: 33709-33919 bp Feature: gene Location: 34023-34595 bp Feature: gene Location: 35068-35274 bp Feature: domain Description: XerD Location: 35083-35221 bp Feature: domain Description: XerD Location: 35083-352 2 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CBS_pair_CA..., RVT-GII, GIIM (pfam08388), XerD (COG4974)

Seq: VMTC01000133.1 Rhodoferax sp. isolate S3_26 k141_55000, whole genome shotgun sequence (56810 bp)
Overview 1 RT 1: 43980-49319 bp Neighborhood of RT #1 [43980, 49375] BrnA_antitoxin COG1373 RVT-GII GIIM Porin_4 Feature: gene Location: 43980-44444 bp Feature: domain Description: BrnA_antitoxin Location: 44241-44415 bp Feature: domain Description: BrnA_antitoxin Location: 44241-44415 bp Feature: gene Location: 44896-45981 bp Feature: domain Description: COG1373 Location: 44920-45934 bp Feature: domain Description: COG13 73 Location: 44920-4593 4 bp Feature: gene Location: 46551-47669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46635-47250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4663 5-47250 bp Feature: domain Description: GIIM Note: maturase Location: 47307-47511 bp Feature: domain Description: GIIM Note: maturase Location: 473 07-47511 bp Feature: gene Location: 47736-47912 bp Feature: gene Location: 48389-49375 bp Feature: domain Description: Porin_4 Location: 48410-49319 bp Feature: domain Description: Porin_4 Location: 48410-493 19 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BrnA_antitoxin (pfam14384), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-GII, GIIM (pfam08388), Porin_4 (pfam13609)