myRT

myRT report for GCA_013792075.1_ASM1379207v1

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Seq: VMSR01000300.1 Desulfobacula sp. isolate S2_67 k141_345155, whole genome shotgun sequence (6855 bp)
Overview 1 RT 1: 157-4865 bp Neighborhood of RT #1 [157, 4951] DUF772 DDE_Tnp_1_6 RVT-GII GIIM AbiEii Feature: gene Location: 157-1680 bp Feature: domain Description: DUF772 Location: 319-538 bp Feature: domain Description: DUF772 Location: 31 9-538 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1138-1489 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 1 38-1 489 bp Feature: gene Location: 1981-3315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2269-2929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2269-2929 bp Feature: domain Description: GIIM Note: maturase Location: 2998-3202 bp Feature: domain Description: GIIM Note: maturase Location: 2998-3202 bp Feature: gene Location: 3402-3632 bp Feature: gene Location: 4361-4951 bp Feature: domain Description: AbiEii Location: 4376-4865 bp Feature: domain Description: AbiEii Location: 4376-4865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF772 (pfam05598), DDE_Tnp_1_6 (pfam13751), RVT-GII, GIIM (pfam08388), AbiEii (pfam08843)

Seq: VMSR01000249.1 Desulfobacula sp. isolate S2_67 k141_367493, whole genome shotgun sequence (6711 bp)
Overview 1 RT 1: 141-4633 bp Neighborhood of RT #1 [141, 4638] RVT_N RVT-GII GIIM integrase_gron integrase_gron PRK06142 Feature: gene Location: 141-1598 bp Feature: RT Description: RVT_N Location: 195-438 bp Feature: RT Description: RVT_N Location: 195-438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483-1122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483-112 2 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1395 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1395 bp Feature: gene Location: 2377-3681 bp Feature: domain Description: integrase_gron Location: 2446-2668 bp Feature: domain Description: integrase_gron Location: 2 446-2 668 bp Feature: domain Description: integrase_gron Location: 2740-3676 bp Feature: domain Description: integrase_gron Location: 2 740-3676 bp Feature: gene Location: 3805-4638 bp Feature: domain Description: PRK06142 Location: 3841-4633 bp Feature: domain Description: PRK06142 Location: 3841-4633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), integrase_gron (TIGR02249), PRK06142 (crotonase/enoyl-CoA hydratase family protein)