myRT

myRT report for GCA_013808505.1_ASM1380850v1

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Seq: JABEEV010000046.1 Lactobacillus plantarum strain Lbio1 NODE_46_length_7295_cov_95.4681, whole genome shotgun sequence (7295 bp)
Overview 1 RT 1: 2370-6837 bp Neighborhood of RT #1 [2370, 6953] Rep_3 DUF536 RVT-Retrons YafQ_toxin PhdYeFM_antitox Feature: gene Location: 2370-3362 bp Feature: domain Description: Rep_3 Location: 2433-3099 bp Feature: domain Description: Rep_3 Location: 2433-3099 bp Feature: gene Location: 3472-3891 bp Feature: domain Description: DUF536 Location: 3640-3781 bp Feature: domain Description: DUF536 Location: 3640-3781 bp Feature: gene Location: 4145-6049 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4277-4868 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4277-4868 bp Feature: gene Location: 6310-6666 bp Feature: domain Description: YafQ_toxin Location: 6325-6622 bp Feature: domain Description: YafQ_toxin Location: 6325-6622 bp Feature: gene Location: 6666-6953 bp Feature: domain Description: PhdYeFM_antitox Location: 6699-6837 bp Feature: domain Description: PhdYeFM_antitox Location: 6699-6837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), DUF536 (pfam04394), RVT-Retrons, YafQ_toxin (pfam15738), PhdYeFM_antitox (pfam02604)