myRT

myRT report for GCA_013808535.1_ASM1380853v1

Download annotations/find similar RTs

Seq: JABEEW010000049.1 Lactobacillus plantarum strain Lbio14 NODE_49_length_7296_cov_86.7168, whole genome shotgun sequence (7296 bp)
Overview 1 RT 1: 2371-6838 bp Neighborhood of RT #1 [2371, 6954] Rep_3 DUF536 RVT-Retrons YafQ_toxin PhdYeFM_antitox Feature: gene Location: 2371-3363 bp Feature: domain Description: Rep_3 Location: 2434-3100 bp Feature: domain Description: Rep_3 Location: 2434-31 00 bp Feature: gene Location: 3473-3892 bp Feature: domain Description: DUF536 Location: 3641-3782 bp Feature: domain Description: DUF536 Location: 3641 -3782 bp Feature: gene Location: 4146-6050 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4278-4869 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4278-4869 bp Feature: gene Location: 6311-6667 bp Feature: domain Description: YafQ_toxin Location: 6326-6623 bp Feature: domain Description: YafQ_toxin Location: 6326-6623 bp Feature: gene Location: 6667-6954 bp Feature: domain Description: PhdYeFM_antitox Location: 6700-6838 bp Feature: domain Description: PhdYeFM_antitox Location: 6700-6838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), DUF536 (pfam04394), RVT-Retrons, YafQ_toxin (pfam15738), PhdYeFM_antitox (pfam02604)