myRT

myRT report for GCA_013811925.1_ASM1381192v1

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Seq: JACCUK010000372.1 Thermoleophilaceae bacterium isolate MGR_bin98 SD2897-2912_k127_8282871, whole genome shotgun sequence (5005 bp)
Overview 1 RT 1: 119-4691 bp Neighborhood of RT #1 [119, 4861] HTH_Tnp_1 HTH_32 DDE_3 RVT-GII RVT-GII GIIM COG3547 Feature: gene Location: 119-1237 bp Feature: domain Description: HTH_Tnp_1 Location: 134-209 bp Feature: domain Description: HTH_Tnp_1 Location: 1 34-209 bp Feature: domain Description: HTH_32 Location: 488-701 bp Feature: domain Description: HTH_32 Location: 488-701 bp Feature: domain Description: DDE_3 Location: 842-1217 bp Feature: domain Description: DDE_3 Location: 842-1 21 7 bp Feature: gene Location: 1834-2691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2149-2596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 49-2596 bp Feature: gene Location: 2751-3296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2763-2838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2763-2838 bp Feature: domain Description: GIIM Note: maturase Location: 2907-3141 bp Feature: domain Description: GIIM Note: maturase Location: 2907-31 41 bp Feature: gene Location: 3289-3579 bp Feature: gene Location: 3695-4861 bp Feature: domain Description: COG3547 Location: 3887-4691 bp Feature: domain Description: COG3547 Location: 3887-4691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), HTH_32 (pfam13565), DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )