myRT

myRT report for GCA_013812565.1_ASM1381256v1

Download annotations/find similar RTs

Seq: JACCTF010000957.1 Pyrinomonadaceae bacterium isolate MGR_bin67 SD2897-2912_k127_1317492, whole genome shotgun sequence (2259 bp)
Overview 1 RT 1: 1-1631 bp Neighborhood of RT #1 [1, 2257] RVT-GII Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 1-192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-1 84 bp Feature: gene Location: 223-432 bp Feature: gene Location: 494-2257 bp Feature: domain Description: Resolvase Location: 512-953 bp Feature: domain Description: Resolvase Location: 51 2-953 bp Feature: domain Description: Recombinase Location: 1040-1403 bp Feature: domain Description: Recombinase Location: 1 040-1 403 bp Feature: domain Description: Zn_ribbon_recom Location: 1445-1631 bp Feature: domain Description: Zn_ribbon_recom Location: 1 445-1 631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: JACCTF010000527.1 Pyrinomonadaceae bacterium isolate MGR_bin67 SD2897-2912_k127_2522166, whole genome shotgun sequence (6505 bp)
Overview 1 RT 1: 948-5911 bp Neighborhood of RT #1 [948, 5911] GIIM HNH RVT_N RVT-GII GIIM HNHc RVT_N RVT-GII Feature: gene Location: 948-1100 bp Feature: gene Location: 1412-2092 bp Feature: domain Description: GIIM Note: maturase Location: 1415-1649 bp Feature: domain Description: GIIM Note: maturase Location: 1415-1649 bp Feature: domain Description: HNH Note: nucleases Location: 1901-2039 bp Feature: domain Description: HNH Note: nucleases Location: 1901-2 039 bp Feature: gene Location: 2217-3920 bp Feature: domain Description: RVT_N Location: 2271-2514 bp Feature: domain Description: RVT_N Location: 2 2 71-2 514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2559-3195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 559-3195 bp Feature: domain Description: GIIM Note: maturase Location: 3255-3483 bp Feature: domain Description: GIIM Note: maturase Location: 32 55-3483 bp Feature: domain Description: HNHc Note: nucleases Location: 3705-3864 bp Feature: domain Description: HNHc Note: nucleases Location: 3705-3864 bp Feature: gene Location: 4177-4320 bp Feature: gene Location: 4424-5515 bp Feature: domain Description: RVT_N Location: 4478-4721 bp Feature: domain Description: RVT_N Location: 4478-472 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4766-5402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4766-5402 bp Feature: gene Location: 5537-5680 bp Feature: gene Location: 5726-5911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNH (pfam01844), RVT_N (pfam13655), RVT-GII, HNHc (smart00507)

Seq: JACCTF010000334.1 Pyrinomonadaceae bacterium isolate MGR_bin67 SD2897-2912_k127_3830258, whole genome shotgun sequence (2430 bp)
Overview 1 RT 1: 70-2340 bp Neighborhood of RT #1 [70, 2340] SCO RVT-GII GIIM Feature: gene Location: 70-717 bp Feature: domain Description: SCO Location: 220-622 bp Feature: domain Description: SCO Location: 220-622 bp Feature: gene Location: 761-2065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1052-1682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1052-1682 bp Feature: domain Description: GIIM Note: maturase Location: 1757-1973 bp Feature: domain Description: GIIM Note: maturase Location: 1757-1973 bp Feature: gene Location: 2209-2340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SCO (cd02968), RVT-GII, GIIM (pfam08388)

Seq: JACCTF010000495.1 Pyrinomonadaceae bacterium isolate MGR_bin67 SD2897-2912_k127_6206920, whole genome shotgun sequence (4064 bp)
Overview 1 RT 1: 3-3175 bp Neighborhood of RT #1 [3, 3175] RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 3-536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 339-534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 339-534 bp Feature: gene Location: 1279-2919 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1906-2752 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1906-2752 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2773-2830 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2773-2830 bp Feature: gene Location: 2984-3175 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: JACCTF010000276.1 Pyrinomonadaceae bacterium isolate MGR_bin67 SD2897-2912_k127_7052642, whole genome shotgun sequence (2690 bp)
Overview 1 RT 1: 2-2671 bp Neighborhood of RT #1 [2, 2671] RVT_N RVT-GII GIIM HNH Feature: gene Location: 2-142 bp Feature: gene Location: 152-427 bp Feature: gene Location: 707-2437 bp Feature: domain Description: RVT_N Location: 791-1034 bp Feature: domain Description: RVT_N Location: 791-1034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1079-1718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1079-1718 bp Feature: domain Description: GIIM Note: maturase Location: 1784-2006 bp Feature: domain Description: GIIM Note: maturase Location: 1784-2006 bp Feature: domain Description: HNH Note: nucleases Location: 2258-2396 bp Feature: domain Description: HNH Note: nucleases Location: 225 8-2396 bp Feature: gene Location: 2441-2671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JACCTF010000478.1 Pyrinomonadaceae bacterium isolate MGR_bin67 SD2897-2912_k127_8978209, whole genome shotgun sequence (4887 bp)
Overview 1 RT 1: 2-4886 bp Neighborhood of RT #1 [2, 4885] integrase_gron integrase_gron RVT-GII GIIM Phage_int_SAM_4 INT_IntI_C Zn_Tnp_IS91 Y2_Tnp Feature: gene Location: 2-331 bp Feature: domain Description: integrase_gron Location: 11-332 bp Feature: domain Description: integrase_gron Location: 11-332 bp Feature: gene Location: 357-851 bp Feature: domain Description: integrase_gron Location: 375-747 bp Feature: domain Description: integrase_gron Location: 375-747 bp Feature: gene Location: 1127-2515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1463-2084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146 3-2084 bp Feature: domain Description: GIIM Note: maturase Location: 2132-2363 bp Feature: domain Description: GIIM Note: maturase Location: 2132-236 3 bp Feature: gene Location: 3095-3943 bp Feature: domain Description: Phage_int_SAM_4 Location: 3107-3353 bp Feature: domain Description: Phage_int_SAM_4 Location: 3107-3353 bp Feature: domain Description: INT_IntI_C Location: 3389-3878 bp Feature: domain Description: INT_IntI_C Location: 3389-3878 bp Feature: gene Location: 3953-4885 bp Feature: domain Description: Zn_Tnp_IS91 Location: 3986-4259 bp Feature: domain Description: Zn_Tnp_IS91 Location: 3986 -4259 bp Feature: domain Description: Y2_Tnp Location: 4385-4886 bp Feature: domain Description: Y2_Tnp Location: 4385-4886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT integrase_gron (TIGR02249), RVT-GII, GIIM (pfam08388), Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193), Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986)