myRT

myRT report for GCA_013817115.1_ASM1381711v1

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Seq: JACDDG010000014.1 Parachlamydiaceae bacterium isolate MGR_bin328 SD2899_NODE_1077_length_15453_cov_1.060812, whole genome shotgun sequence (15453 bp)
Overview 1 RT 1: 64-4599 bp Neighborhood of RT #1 [64, 4625] RVT-GII LysM PRK04210 Feature: gene Location: 64-1059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283-901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283-901 bp Feature: gene Location: 1444-2787 bp Feature: domain Description: LysM Location: 2653-2779 bp Feature: domain Description: LysM Location: 2653-2779 bp Feature: gene Location: 2760-4625 bp Feature: domain Description: PRK04210 Location: 2787-4599 bp Feature: domain Description: PRK0421 0 Location: 2787-4599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysM (smart00257), PRK04210 (phosphoenolpyruvate carboxykinase (GTP)), RVT-GII

Seq: JACDDG010000021.1 Parachlamydiaceae bacterium isolate MGR_bin328 SD2899_NODE_1345_length_13243_cov_1.090881, whole genome shotgun sequence (13243 bp)
Overview 1 RT 1: 10148-13242 bp Neighborhood of RT #1 [10148, 13242] FkpA RVT-GII GIIM Feature: gene Location: 10148-11146 bp Feature: domain Description: FkpA Location: 10346-10928 bp Feature: domain Description: FkpA Location: 10346-1092 8 bp Feature: gene Location: 11450-11857 bp Feature: gene Location: 11927-12889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12365-12518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 365-12 518 bp Feature: domain Description: GIIM Note: maturase Location: 12596-12812 bp Feature: domain Description: GIIM Note: maturase Location: 12 596-12 812 bp Feature: gene Location: 13033-13242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FkpA (COG0545), RVT-GII, GIIM (pfam08388)

Seq: JACDDG010000481.1 Parachlamydiaceae bacterium isolate MGR_bin328 SD2899_NODE_23952_length_2258_cov_1.586579, whole genome shotgun sequence (2258 bp)
Overview 1 RT 1: 3-2134 bp Neighborhood of RT #1 [3, 2211] RVT-GII GIIM hemC Feature: gene Location: 3-803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117-282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117-282 bp Feature: domain Description: GIIM Note: maturase Location: 333-567 bp Feature: domain Description: GIIM Note: maturase Location: 3 3 3 -567 bp Feature: gene Location: 948-1097 bp Feature: gene Location: 1291-2211 bp Feature: domain Description: hemC Location: 1312-2134 bp Feature: domain Description: hemC Location: 13 12-213 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hemC (TIGR00212), RVT-GII, GIIM (pfam08388)

Seq: JACDDG010000491.1 Parachlamydiaceae bacterium isolate MGR_bin328 SD2899_NODE_25989_length_2157_cov_1.287685, whole genome shotgun sequence (2157 bp)
Overview 1 RT 1: 3-1351 bp Neighborhood of RT #1 [3, 1560] RVT-GII INT_RitC_C_like DUF1016_N Feature: gene Location: 3-431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-399 bp Feature: gene Location: 509-1042 bp Feature: domain Description: INT_RitC_C_like Location: 515-959 bp Feature: domain Description: INT_RitC_C_like Location: 515-959 bp Feature: gene Location: 1153-1560 bp Feature: domain Description: DUF1016_N Location: 1198-1351 bp Feature: domain Description: DUF1016_N Location: 1198-1351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1016_N (pfam17761), RVT-GII, INT_RitC_C_like (cd01182)

Seq: JACDDG010000202.1 Parachlamydiaceae bacterium isolate MGR_bin328 SD2899_NODE_5533_length_5226_cov_1.000981, whole genome shotgun sequence (5226 bp)
Overview 1 RT 1: 274-2849 bp Neighborhood of RT #1 [274, 2849] RVT-DGRs Avd_like Feature: gene Location: 274-1326 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 484-1105 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 484-1105 bp Feature: gene Location: 1325-1684 bp Feature: domain Description: Avd_like Location: 1361-1673 bp Feature: domain Description: Avd_like Location: 1361-1673 bp Feature: gene Location: 2631-2849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: JACDDG010000210.1 Parachlamydiaceae bacterium isolate MGR_bin328 SD2899_NODE_5688_length_5146_cov_1.225144, whole genome shotgun sequence (5146 bp)
Overview 1 RT 1: 480-5072 bp Neighborhood of RT #1 [480, 5086] RVT-GII TPR metallo-hydrolase-like_MBL-fold PseC Feature: gene Location: 480-1007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 678-969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 78-96 9 bp Feature: gene Location: 1776-3560 bp Feature: domain Description: TPR Location: 1938-2142 bp Feature: domain Description: TPR Location: 1938-2142 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 2619-2811 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 26 19-2811 bp Feature: gene Location: 3902-5086 bp Feature: domain Description: PseC Location: 3920-5072 bp Feature: domain Description: PseC Location: 3920-5072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), metallo-hydrolase-like_MBL-fold (cl23716), PseC (TIGR03588), RVT-GII

Seq: JACDDG010000264.1 Parachlamydiaceae bacterium isolate MGR_bin328 SD2899_NODE_7574_length_4369_cov_1.127534, whole genome shotgun sequence (4369 bp)
Overview 1 RT 1: 157-3816 bp Neighborhood of RT #1 [157, 3890] Avd_like RVT-DGRs RVT-DGRs tRNA_edit Feature: gene Location: 157-297 bp Feature: gene Location: 564-923 bp Feature: domain Description: Avd_like Location: 600-912 bp Feature: domain Description: Avd_like Location: 600-912 bp Feature: gene Location: 952-1347 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1129-1345 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1129-1345 bp Feature: gene Location: 1350-1982 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1353-1764 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1353-17 64 bp Feature: gene Location: 2229-3098 bp Feature: gene Location: 3492-3890 bp Feature: domain Description: tRNA_edit Location: 3585-3816 bp Feature: domain Description: tRNA_edit Location: 3585-3816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), tRNA_edit (pfam04073)

Seq: JACDDG010000296.1 Parachlamydiaceae bacterium isolate MGR_bin328 SD2899_NODE_9073_length_3930_cov_1.098606, whole genome shotgun sequence (3930 bp)
Overview 1 RT 1: 950-3742 bp Neighborhood of RT #1 [950, 3742] DnaJ RVT-GII Phage_int_SAM_1 INT_RitA_C_like Feature: gene Location: 950-1096 bp Feature: gene Location: 1220-1582 bp Feature: domain Description: DnaJ Location: 1376-1574 bp Feature: domain Description: DnaJ Location: 1376-1574 bp Feature: gene Location: 1677-1970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1680-1926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168 0-1926 bp Feature: gene Location: 2146-3378 bp Feature: domain Description: Phage_int_SAM_1 Location: 2500-2725 bp Feature: domain Description: Phage_int_SAM_1 Location: 2500-2725 bp Feature: domain Description: INT_RitA_C_like Location: 2815-3346 bp Feature: domain Description: INT_RitA_C_like Location: 28 15-3346 bp Feature: gene Location: 3371-3742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DnaJ (smart00271), RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188)