myRT

myRT report for GCA_013817595.1_ASM1381759v1

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Seq: JACDCK010000278.1 Pyrinomonadaceae bacterium isolate MGR_bin306 SD2897_NODE_12122_length_3382_cov_0.645776, whole genome shotgun sequence (3382 bp)
Overview 1 RT 1: 1-3307 bp Neighborhood of RT #1 [1, 3381] L1-EN RVT-UNC RnhA Feature: gene Location: 1-3381 bp Feature: domain Description: L1-EN Location: 106-640 bp Feature: domain Description: L1 -EN Location: 1 06-640 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1642-2233 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 642-2233 bp Feature: domain Description: RnhA Location: 3097-3307 bp Feature: domain Description: RnhA Location: 3097-3307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG27/RVT-CRISPR/RVT-GII(RVT-UNC), RnhA (COG0328)

Seq: JACDCK010000303.1 Pyrinomonadaceae bacterium isolate MGR_bin306 SD2897_NODE_14832_length_3031_cov_0.940771, whole genome shotgun sequence (3031 bp)
Overview 1 RT 1: 144-2172 bp Neighborhood of RT #1 [144, 3029] RVT-UNC zf-RVT Feature: gene Location: 144-3029 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 603-1206 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 603-12 06 bp Feature: domain Description: zf-RVT Location: 2004-2172 bp Feature: domain Description: zf-RVT Location: 2 004-2 172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC), zf-RVT (pfam13966)

Seq: JACDCK010000324.1 Pyrinomonadaceae bacterium isolate MGR_bin306 SD2897_NODE_17280_length_2793_cov_1.237809, whole genome shotgun sequence (2793 bp)
Overview 1 RT 1: 568-2790 bp Neighborhood of RT #1 [568, 2790] RVT-GII GIIM Feature: gene Location: 568-747 bp Feature: gene Location: 768-2102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1122-1749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1122-1749 bp Feature: domain Description: GIIM Note: maturase Location: 1788-2001 bp Feature: domain Description: GIIM Note: maturase Location: 1788-2001 bp Feature: gene Location: 2208-2366 bp Feature: gene Location: 2608-2790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACDCK010000340.1 Pyrinomonadaceae bacterium isolate MGR_bin306 SD2897_NODE_19366_length_2631_cov_0.806709, whole genome shotgun sequence (2631 bp)
Overview 1 RT 1: 439-2554 bp Neighborhood of RT #1 [439, 2628] RVT-GII GIIM Cupin_2 Feature: gene Location: 439-591 bp Feature: gene Location: 855-2150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1110-1776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1110-1776 bp Feature: domain Description: GIIM Note: maturase Location: 1854-2067 bp Feature: domain Description: GIIM Note: maturase Location: 1854 -2067 bp Feature: gene Location: 2175-2318 bp Feature: gene Location: 2329-2628 bp Feature: domain Description: Cupin_2 Location: 2359-2554 bp Feature: domain Description: Cupin_2 Location: 2359-2554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Cupin_2 (pfam07883)

Seq: JACDCK010000140.1 Pyrinomonadaceae bacterium isolate MGR_bin306 SD2897_NODE_2367_length_7966_cov_1.342518, whole genome shotgun sequence (7966 bp)
Overview 1 RT 1: 2513-7892 bp Neighborhood of RT #1 [2513, 7963] Retrotrans_gag retropepsin_like RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve Feature: gene Location: 2513-2911 bp Feature: gene Location: 3000-4418 bp Feature: domain Description: Retrotrans_gag Location: 3402-3612 bp Feature: domain Description: Retrotrans_gag Location: 3402-3612 bp Feature: gene Location: 4427-7963 bp Feature: domain Description: retropepsin_like Location: 4925-5183 bp Feature: domain Description: retropepsin_like Location: 4925 -5 183 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 6047-6206 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 6047-6206 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 6530-6911 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 65 30-6911 bp Feature: domain Description: Integrase_H2C2 Location: 7337-7502 bp Feature: domain Description: Integrase_H2C2 Location: 7337-75 02 bp Feature: domain Description: rve Location: 7550-7892 bp Feature: domain Description: rve Location: 75 5 0-7892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Retrotrans_gag (pfam03732), retropepsin_like (cd00303), RVT-UG20/RVT-UG26/RVT-UG9/RVT-G2L4(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665)

Seq: JACDCK010000391.1 Pyrinomonadaceae bacterium isolate MGR_bin306 SD2897_NODE_26511_length_2234_cov_1.064547, whole genome shotgun sequence (2234 bp)
Overview 1 RT 1: 233-2148 bp Neighborhood of RT #1 [233, 2231] RVT-GII GIIM Feature: gene Location: 233-406 bp Feature: gene Location: 706-948 bp Feature: gene Location: 1113-2231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1209-1848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1209-1848 bp Feature: domain Description: GIIM Note: maturase Location: 1920-2148 bp Feature: domain Description: GIIM Note: maturase Location: 1920-2148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACDCK010000405.1 Pyrinomonadaceae bacterium isolate MGR_bin306 SD2897_NODE_28188_length_2161_cov_0.894789, whole genome shotgun sequence (2161 bp)
Overview 1 RT 1: 66-2154 bp Neighborhood of RT #1 [66, 2159] DDE_Tnp_1 RVT_N RVT-GII Feature: gene Location: 66-314 bp Feature: gene Location: 325-1674 bp Feature: domain Description: DDE_Tnp_1 Location: 904-1414 bp Feature: domain Description: DDE_Tnp_1 Location: 904-1414 bp Feature: gene Location: 1749-2159 bp Feature: domain Description: RVT_N Location: 1752-1851 bp Feature: domain Description: RVT_N Location: 17 52-1851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1893-2154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1893-2154 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT_N (pfam13655), RVT-GII

Seq: JACDCK010000044.1 Pyrinomonadaceae bacterium isolate MGR_bin306 SD2897_NODE_810_length_13460_cov_1.069002, whole genome shotgun sequence (13460 bp)
Overview 1 RT 1: 752-3013 bp Neighborhood of RT #1 [752, 3013] RVT_N RVT-GII GIIM McrA Feature: gene Location: 752-2404 bp Feature: domain Description: RVT_N Location: 788-1034 bp Feature: domain Description: RVT_N Location: 78 8 -1034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1076-1730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1076-1730 bp Feature: domain Description: GIIM Note: maturase Location: 1835-2063 bp Feature: domain Description: GIIM Note: maturase Location: 18 35-2063 bp Feature: domain Description: McrA Location: 2111-2399 bp Feature: domain Description: McrA Location: 2111-2399 bp Feature: gene Location: 2655-2855 bp Feature: gene Location: 2870-3013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: JACDCK010000239.1 Pyrinomonadaceae bacterium isolate MGR_bin306 SD2897_NODE_8520_length_4075_cov_1.575988, whole genome shotgun sequence (4075 bp)
Overview 1 RT 1: 1163-3997 bp Neighborhood of RT #1 [1163, 4074] TPR TPR TPR_2 TPR RVT-GII GIIM Feature: gene Location: 1163-1480 bp Feature: gene Location: 1687-2934 bp Feature: domain Description: TPR Location: 1879-2161 bp Feature: domain Description: TPR Location: 1879 -2161 bp Feature: domain Description: TPR Location: 2194-2416 bp Feature: domain Description: TPR Location: 219 4-2416 bp Feature: domain Description: TPR_2 Location: 2500-2587 bp Feature: domain Description: TPR_2 Location: 2500-2587 bp Feature: domain Description: TPR Location: 2602-2875 bp Feature: domain Description: TPR Location: 2602-2875 bp Feature: gene Location: 3163-4074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3166-3706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3166-3706 bp Feature: domain Description: GIIM Note: maturase Location: 3784-3997 bp Feature: domain Description: GIIM Note: maturase Location: 3784-39 9 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), TPR_2 (pfam07719), RVT-GII, GIIM (pfam08388)

Seq: JACDCK010000055.1 Pyrinomonadaceae bacterium isolate MGR_bin306 SD2897_NODE_922_length_12665_cov_1.363216, whole genome shotgun sequence (12665 bp)
Overview 1 RT 1: 2-1107 bp Neighborhood of RT #1 [2, 1107] RVT-GII Feature: gene Location: 2-325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185-326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185-326 bp Feature: gene Location: 429-725 bp Feature: gene Location: 958-1107 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII