myRT

myRT report for GCA_013820765.1_ASM1382076v1

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Seq: JABJVM010000015.1 Listeria sp. W9-0585 strain FSL W9-0585 NODE_15_length_81251_cov_50.012487, whole genome shotgun sequence (81251 bp)
Overview 1 RT 1: 14608-20821 bp Neighborhood of RT #1 [14608, 20994] MngR PBP1_AraR RVT-GII GIIM MFS_XylE_like FGGY_L-RBK_like Feature: gene Location: 14608-15786 bp Feature: domain Description: MngR Location: 14707-14935 bp Feature: domain Description: MngR Location: 1 4707-1 4935 bp Feature: domain Description: PBP1_AraR Location: 14962-15772 bp Feature: domain Description: PBP1 _AraR Location: 1 4962-1 5772 bp Feature: gene Location: 15939-16070 bp Feature: gene Location: 16315-17679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16606-17227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6606-1 7227 bp Feature: domain Description: GIIM Note: maturase Location: 17290-17518 bp Feature: domain Description: GIIM Note: maturase Location: 1 7290-1 751 8 bp Feature: gene Location: 17779-19170 bp Feature: domain Description: MFS_XylE_like Location: 17812-19102 bp Feature: domain Description: MFS_XylE_like Location: 1 781 2-1 91 02 bp Feature: gene Location: 19387-20994 bp Feature: domain Description: FGGY_L-RBK_like Location: 19429-20821 bp Feature: domain Description: FGGY_L-RBK_like Location: 1 9429-20821 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MngR (COG2188), PBP1_AraR (cd01541), RVT-GII, GIIM (pfam08388), MFS_XylE_like (cd17359), FGGY_L-RBK_like (cd07778)

Seq: JABJVM010000004.1 Listeria sp. W9-0585 strain FSL W9-0585 NODE_4_length_250555_cov_57.634482, whole genome shotgun sequence (250555 bp)
Overview 1 RT 1: 13374-16029 bp Neighborhood of RT #1 [13374, 16029] RVT-GII GIIM group_II_RT_mat Feature: gene Location: 13374-13814 bp Feature: gene Location: 13824-14324 bp Feature: gene Location: 14317-15240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14323-14788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1432 3-14788 bp Feature: domain Description: GIIM Note: maturase Location: 14851-15079 bp Feature: domain Description: GIIM Note: maturase Location: 14851-15079 bp Feature: gene Location: 15306-15599 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 15348-15549 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 15348-15549 bp Feature: gene Location: 15598-16029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416)

Seq: JABJVM010000006.1 Listeria sp. W9-0585 strain FSL W9-0585 NODE_6_length_181878_cov_60.741691, whole genome shotgun sequence (181878 bp)
Overview 1 RT 1: 53765-59787 bp Neighborhood of RT #1 [53765, 59810] FolA AL_MDR RVT-UG7 Rpe TktA Feature: gene Location: 53765-54283 bp Feature: domain Description: FolA Location: 53783-54263 bp Feature: domain Description: FolA Location: 53 783 -54263 bp Feature: gene Location: 54264-55298 bp Feature: domain Description: AL_MDR Location: 54267-55266 bp Feature: domain Description: AL_MDR Location: 54267-55266 bp Feature: gene Location: 55365-57005 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 55824-56211 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 55824-56211 bp Feature: gene Location: 57118-57693 bp Feature: domain Description: Rpe Location: 57124-57673 bp Feature: domain Description: Rpe Location: 57124-57673 bp Feature: gene Location: 57756-59810 bp Feature: domain Description: TktA Location: 57801-59787 bp Feature: domain Description: TktA Location: 57801-59787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FolA (COG0262), AL_MDR (cd08252), RVT-UG7, Rpe (COG0036), TktA (COG0021)