myRT

myRT report for GCA_013821325.1_ASM1382132v1

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Seq: JACDGY010000527.1 Bacteroidetes bacterium isolate MGR_bin424 SD2909_NODE_28051_length_2183_cov_0.550584, whole genome shotgun sequence (2183 bp)
Overview 1 RT 1: 1-2142 bp Neighborhood of RT #1 [1, 2180] pyrF RVT-GII GldD_lipo PRK02406 Feature: gene Location: 1-186 bp Feature: domain Description: pyrF Location: 4-157 bp Feature: domain Description: pyrF Location: 4-1 57 bp Feature: gene Location: 269-409 bp Feature: gene Location: 445-1071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451-829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451 -829 bp Feature: domain Description: GldD_lipo Location: 865-1063 bp Feature: domain Description: GldD_lipo Location: 865-1 063 bp Feature: gene Location: 1605-2180 bp Feature: domain Description: PRK02406 Location: 1611-2142 bp Feature: domain Description: PRK02406 Location: 1 61 1 -21 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pyrF (TIGR01740), PRK02406 (DNA polymerase IV; Validated), RVT-GII, GldD_lipo (TIGR03512)

Seq: JACDGY010000543.1 Bacteroidetes bacterium isolate MGR_bin424 SD2909_NODE_29005_length_2148_cov_0.516081, whole genome shotgun sequence (2148 bp)
Overview 1 RT 1: 590-1957 bp Neighborhood of RT #1 [590, 2145] RVT-GII Feature: gene Location: 590-730 bp Feature: gene Location: 932-1081 bp Feature: gene Location: 1078-2145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1276-1957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 76-1957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACDGY010000611.1 Bacteroidetes bacterium isolate MGR_bin424 SD2909_NODE_33498_length_2003_cov_0.894989, whole genome shotgun sequence (2003 bp)
Overview 1 RT 1: 1-1877 bp Neighborhood of RT #1 [1, 1877] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM Feature: gene Location: 1-339 bp Feature: domain Description: DDE_Tnp_IS66 Location: 10-190 bp Feature: domain Description: DDE_Tnp_IS66 Location: 10-190 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 211-319 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 211-3 19 bp Feature: gene Location: 468-1697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 681-1338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 681-13 3 8 bp Feature: domain Description: GIIM Note: maturase Location: 1419-1623 bp Feature: domain Description: GIIM Note: maturase Location: 1419-1623 bp Feature: gene Location: 1719-1877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388)