myRT

myRT report for GCA_013821375.1_ASM1382137v1

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Seq: JACDGZ010000507.1 Nitrospirales bacterium isolate MGR_bin425 SD2909_NODE_12332_length_3196_cov_0.537309, whole genome shotgun sequence (3196 bp)
Overview 1 RT 1: 3-3027 bp Neighborhood of RT #1 [3, 3053] DUF4062 AAA_16 RVT-DGRs Avd_like Feature: gene Location: 3-1055 bp Feature: domain Description: DUF4062 Location: 18-261 bp Feature: domain Description: DUF4062 Location: 1 8-261 bp Feature: domain Description: AAA_16 Location: 570-942 bp Feature: domain Description: AAA_1 6 Location: 570-942 bp Feature: gene Location: 1410-1574 bp Feature: gene Location: 1627-2667 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1801-2446 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 801 -2446 bp Feature: gene Location: 2697-3053 bp Feature: domain Description: Avd_like Location: 2724-3027 bp Feature: domain Description: Avd_like Location: 2724-3027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF4062 (pfam13271), AAA_16 (pfam13191)

Seq: JACDGZ010000167.1 Nitrospirales bacterium isolate MGR_bin425 SD2909_NODE_4078_length_5354_cov_1.596518, whole genome shotgun sequence (5354 bp)
Overview 1 RT 1: 1711-5321 bp Neighborhood of RT #1 [1711, 5353] RVT-GII GIIM PHA02517 Feature: gene Location: 1711-2070 bp Feature: gene Location: 2094-2306 bp Feature: gene Location: 2863-4389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3136-3868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3136-3868 bp Feature: domain Description: GIIM Note: maturase Location: 3982-4141 bp Feature: domain Description: GIIM Note: maturase Location: 3982 -4141 bp Feature: gene Location: 4504-4707 bp Feature: gene Location: 5021-5353 bp Feature: domain Description: PHA02517 Location: 5063-5321 bp Feature: domain Description: PHA02 517 Location: 5063-532 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)