myRT

myRT report for GCA_013821685.1_ASM1382168v1

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Seq: JACDGD010000512.1 Acidobacteriales bacterium isolate MGR_bin403 SD2908_NODE_12642_length_3767_cov_0.934341, whole genome shotgun sequence (3767 bp)
Overview 1 RT 1: 2166-3766 bp Neighborhood of RT #1 [2166, 3765] COG3666 group_II_RT_mat RVT-UG19 Feature: gene Location: 2166-2336 bp Feature: gene Location: 2489-3013 bp Feature: domain Description: COG3666 Location: 2534-2885 bp Feature: domain Description: COG3666 Location: 2534-2885 bp Feature: gene Location: 3151-3765 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3187-3436 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 31 87-3436 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 3514-3766 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 351 4-3766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3666 (Transposase ), group_II_RT_mat (TIGR04416), RVT-UG19

Seq: JACDGD010000791.1 Acidobacteriales bacterium isolate MGR_bin403 SD2908_NODE_20767_length_2692_cov_0.658090, whole genome shotgun sequence (2692 bp)
Overview 1 RT 1: 1-1412 bp Neighborhood of RT #1 [1, 2689] VCBS RVT-UG19 Feature: gene Location: 1-360 bp Feature: domain Description: VCBS Location: 145-244 bp Feature: domain Description: VCBS Location: 145-2 44 bp Feature: gene Location: 658-1245 bp Feature: gene Location: 1232-2689 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 1235-1412 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 12 35-1412 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VCBS (pfam13517), RVT-UG19

Seq: JACDGD010000799.1 Acidobacteriales bacterium isolate MGR_bin403 SD2908_NODE_20957_length_2675_cov_0.543171, whole genome shotgun sequence (2675 bp)
Overview 1 RT 1: 3-2674 bp Neighborhood of RT #1 [3, 2674] M28_like RVT-GII GIIM Feature: gene Location: 3-407 bp Feature: domain Description: M28_like Location: 6-387 bp Feature: domain Description: M28_like Location: 6-3 87 bp Feature: gene Location: 639-1964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 942-1584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 942-1584 bp Feature: domain Description: GIIM Note: maturase Location: 1659-1872 bp Feature: domain Description: GIIM Note: maturase Location: 1659-1872 bp Feature: gene Location: 702-2495 bp Feature: gene Location: 2531-2674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M28_like (cd08656), RVT-GII, GIIM (pfam08388)

Seq: JACDGD010000832.1 Acidobacteriales bacterium isolate MGR_bin403 SD2908_NODE_22179_length_2583_cov_1.075733, whole genome shotgun sequence (2583 bp)
Overview 1 RT 1: 87-2459 bp Neighborhood of RT #1 [87, 2459] Transposase_mut RVT-GII GIIM Feature: gene Location: 87-542 bp Feature: domain Description: Transposase_mut Location: 93-423 bp Feature: domain Description: Transposase_mut Location: 93-4 23 bp Feature: gene Location: 721-2007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1024-1639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1024 -1639 bp Feature: domain Description: GIIM Note: maturase Location: 1717-1939 bp Feature: domain Description: GIIM Note: maturase Location: 1717-1939 bp Feature: gene Location: 2094-2459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), RVT-GII, GIIM (pfam08388)

Seq: JACDGD010000884.1 Acidobacteriales bacterium isolate MGR_bin403 SD2908_NODE_24532_length_2417_cov_0.872926, whole genome shotgun sequence (2417 bp)
Overview 1 RT 1: 3-2368 bp Neighborhood of RT #1 [3, 2415] RVT-GII RVT-GII GIIM DDE_Tnp_ISL3 Feature: gene Location: 3-677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93-678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93-678 bp Feature: gene Location: 716-1996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950-1610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95 0-1610 bp Feature: domain Description: GIIM Note: maturase Location: 1688-1907 bp Feature: domain Description: GIIM Note: maturase Location: 1688-1907 bp Feature: gene Location: 2275-2415 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2278-2368 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2278-2368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_ISL3 (pfam01610)

Seq: JACDGD010000957.1 Acidobacteriales bacterium isolate MGR_bin403 SD2908_NODE_27328_length_2257_cov_0.630986, whole genome shotgun sequence (2257 bp)
Overview 1 RT 1: 1-2107 bp Neighborhood of RT #1 [1, 2130] Resolvase Recombinase PHA02938 RVT-GII Feature: gene Location: 1-747 bp Feature: domain Description: Resolvase Location: 13-454 bp Feature: domain Description: Resolvase Location: 13-454 bp Feature: domain Description: Recombinase Location: 538-733 bp Feature: domain Description: Recombinase Location: 538-733 bp Feature: gene Location: 891-1220 bp Feature: domain Description: PHA02938 Location: 1077-1200 bp Feature: domain Description: PHA02938 Location: 1077-1200 bp Feature: gene Location: 1291-2130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1702-2107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1702-2107 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), PHA02938 (hypothetical protein; Provisional), RVT-GII

Seq: JACDGD010000397.1 Acidobacteriales bacterium isolate MGR_bin403 SD2908_NODE_9987_length_4414_cov_1.246793, whole genome shotgun sequence (4414 bp)
Overview 1 RT 1: 2-3516 bp Neighborhood of RT #1 [2, 3527] RVT-GII Gloeo_Verruco Gloeo_Verruco Gloeo_Verruco Gloeo_Verruco Gloeo_Verruco Gloeo_Verruco Gloeo_Verruco IPT IPT Feature: gene Location: 2-1072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287-926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287 -926 bp Feature: gene Location: 1123-1677 bp Feature: gene Location: 1881-3527 bp Feature: domain Description: Gloeo_Verruco Location: 2052-2151 bp Feature: domain Description: Gloeo_Verruco Location: 2052-2151 bp Feature: domain Description: Gloeo_Verruco Location: 2205-2301 bp Feature: domain Description: Gloeo_Verruco Location: 2205-2301 bp Feature: domain Description: Gloeo_Verruco Location: 2352-2448 bp Feature: domain Description: Gloeo_Verruco Location: 2352-2448 bp Feature: domain Description: Gloeo_Verruco Location: 2499-2598 bp Feature: domain Description: Gloeo_Verruco Location: 2499-2598 bp Feature: domain Description: Gloeo_Verruco Location: 2649-2751 bp Feature: domain Description: Gloeo_Verruco Location: 2649-27 51 bp Feature: domain Description: Gloeo_Verruco Location: 2814-2913 bp Feature: domain Description: Gloeo_Verruco Location: 2814-2913 bp Feature: domain Description: Gloeo_Verruco Location: 2967-3030 bp Feature: domain Description: Gloeo_Verruco Location: 2967 -3030 bp Feature: domain Description: IPT Location: 3060-3219 bp Feature: domain Description: IPT Location: 3060-3219 bp Feature: domain Description: IPT Location: 3282-3516 bp Feature: domain Description: IPT Location: 3282-3516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Gloeo_Verruco (TIGR03803), IPT (smart00429)