myRT

myRT report for GCA_013822265.1_ASM1382226v1

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Seq: PNKD01000040.1 Leptothrix sp. (in: Bacteria) isolate PR.3.46 PR_1000549_28107, whole genome shotgun sequence (28107 bp)
Overview 1 RT 1: 6995-13823 bp Neighborhood of RT #1 [6995, 13825] PasI DUF4124 RVT_N RVT-GII GIIM HNHc PRK05567 guaA Feature: gene Location: 6995-7207 bp Feature: domain Description: PasI Location: 7001-7196 bp Feature: domain Description: PasI Location: 7001 -71 96 bp Feature: gene Location: 7232-7744 bp Feature: domain Description: DUF4124 Location: 7283-7448 bp Feature: domain Description: DUF41 24 Location: 7283-7448 bp Feature: gene Location: 8824-10524 bp Feature: RT Description: RVT_N Location: 8881-9118 bp Feature: RT Description: RVT_N Location: 8881 -91 1 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9172-9820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 72-9820 bp Feature: domain Description: GIIM Note: maturase Location: 9871-10105 bp Feature: domain Description: GIIM Note: maturase Location: 9871 -1 01 05 bp Feature: domain Description: HNHc Note: nucleases Location: 10324-10486 bp Feature: domain Description: HNHc Note: nucleases Location: 1 0324-1 0486 bp Feature: gene Location: 10686-12152 bp Feature: domain Description: PRK05567 Location: 10692-12147 bp Feature: domain Description: PRK05567 Location: 1 0692-1 21 47 bp Feature: gene Location: 12218-13825 bp Feature: domain Description: guaA Location: 12245-13823 bp Feature: domain Description: guaA Location: 1 2245-1 3823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05567 (inosine 5'-monophosphate dehydrogenase; Reviewed), guaA (PRK00074), PasI (COG2914), DUF4124 (pfam13511), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: PNKD01000148.1 Leptothrix sp. (in: Bacteria) isolate PR.3.46 PR_1002269_9900, whole genome shotgun sequence (9900 bp)
Overview 1 RT 1: 5500-9888 bp Neighborhood of RT #1 [5500, 9899] PRK05429 obgE RVT-GII GIIM rpmA Feature: gene Location: 5500-6621 bp Feature: domain Description: PRK05429 Location: 5524-6616 bp Feature: domain Description: PRK0542 9 Location: 552 4-6616 bp Feature: gene Location: 6614-7738 bp Feature: domain Description: obgE Location: 6662-7673 bp Feature: domain Description: obgE Location: 6662 -7673 bp Feature: gene Location: 7869-9065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8034-8646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8034-8646 bp Feature: domain Description: GIIM Note: maturase Location: 8703-8922 bp Feature: domain Description: GIIM Note: maturase Location: 8703-892 2 bp Feature: gene Location: 9669-9899 bp Feature: domain Description: rpmA Location: 9672-9888 bp Feature: domain Description: rpmA Location: 9672 -9888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05429 (gamma-glutamyl kinase; Provisional), obgE (PRK12299), RVT-GII, GIIM (pfam08388), rpmA (PRK05435)