myRT

myRT report for GCA_013823925.1_ASM1382392v1

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Seq: PNMX01000037.1 Cyclobacterium sp. isolate BC.039 BC_1000653_40293, whole genome shotgun sequence (40293 bp)
Overview 1 RT 1: 35837-40203 bp Neighborhood of RT #1 [35837, 40214] YfmG YfmG RVT-DGRs recQ YfmG Feature: gene Location: 35837-36589 bp Feature: domain Description: YfmG Location: 35924-36581 bp Feature: domain Description: YfmG Location: 35924-36581 bp Feature: gene Location: 36794-37549 bp Feature: domain Description: YfmG Location: 36875-37538 bp Feature: domain Description: YfmG Location: 36875-37538 bp Feature: gene Location: 37756-38823 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37966-38551 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37966-38551 bp Feature: gene Location: 38820-39278 bp Feature: domain Description: recQ Location: 39036-39252 bp Feature: domain Description: recQ Location: 39036-39252 bp Feature: gene Location: 39384-40214 bp Feature: domain Description: YfmG Location: 39522-40203 bp Feature: domain Description: YfmG Location: 39522-40203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, recQ (TIGR01389)

Seq: PNMX01000067.1 Cyclobacterium sp. isolate BC.039 BC_1007107_7042, whole genome shotgun sequence (7042 bp)
Overview 1 RT 1: 126-4509 bp Neighborhood of RT #1 [126, 4805] RVT-GII GIIM Fur DUF5118 DUF5117 ZnMc_MMP_like_2 DUF4953 Feature: gene Location: 126-1217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153-402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153-402 bp Feature: domain Description: GIIM Note: maturase Location: 456-660 bp Feature: domain Description: GIIM Note: maturase Location: 456-660 bp Feature: gene Location: 1779-2192 bp Feature: domain Description: Fur Location: 1800-2190 bp Feature: domain Description: Fur Location: 1800-2 190 bp Feature: gene Location: 2271-4805 bp Feature: domain Description: DUF5118 Location: 2445-2592 bp Feature: domain Description: DUF5118 Location: 2 445-2 592 bp Feature: domain Description: DUF5117 Location: 2616-3177 bp Feature: domain Description: DUF5117 Location: 2 616-3177 bp Feature: domain Description: ZnMc_MMP_like_2 Location: 3210-3570 bp Feature: domain Description: ZnMc_MMP_like_2 Location: 32 10-3570 bp Feature: domain Description: DUF4953 Location: 3585-4509 bp Feature: domain Description: DUF4953 Location: 3585-4509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Fur (COG0735), DUF5118 (pfam17162), DUF5117 (pfam17148), ZnMc_MMP_like_2 (cd04276), DUF4953 (pfam16313)