myRT

myRT report for GCA_013850855.1_ASM1385085v1

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Seq: JACCGP010000015.1 Escherichia coli strain GCPRC19A Contig_15_63.2867, whole genome shotgun sequence (186189 bp)
Overview 1 RT 1: 51545-55427 bp Neighborhood of RT #1 [51545, 55432] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 51545-52003 bp Feature: domain Description: dut Location: 51551-51998 bp Feature: domain Description: dut Location: 51 551 -51 998 bp Feature: gene Location: 52110-52706 bp Feature: domain Description: slmA Location: 52116-52692 bp Feature: domain Description: slmA Location: 521 1 6-52692 bp Feature: gene Location: 52752-53711 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52887-53436 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52887-53436 bp Feature: gene Location: 54009-54665 bp Feature: domain Description: pyrE Location: 54027-54660 bp Feature: domain Description: pyrE Location: 54027-54660 bp Feature: gene Location: 54716-55432 bp Feature: domain Description: rph Location: 54719-55427 bp Feature: domain Description: rph Location: 5471 9-55427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: JACCGP010000048.1 Escherichia coli strain GCPRC19A Contig_48_58.5565, whole genome shotgun sequence (372647 bp)
Overview 1 RT 1: 368634-371356 bp Neighborhood of RT #1 [368634, 371442] PyrBI_leader RVT-GII GIIM RVT-GII CdiI_3 Feature: gene Location: 368634-368846 bp Feature: domain Description: PyrBI_leader Location: 368718-368844 bp Feature: domain Description: PyrBI_leader Location: 368718-368844 bp Feature: gene Location: 368849-369067 bp Feature: gene Location: 369317-370087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369320-369734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36932 0-369734 bp Feature: domain Description: GIIM Note: maturase Location: 369785-369950 bp Feature: domain Description: GIIM Note: maturase Location: 369785-369950 bp Feature: gene Location: 370126-370608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370447-370534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370447-370534 bp Feature: gene Location: 370591-371055 bp Feature: gene Location: 371056-371442 bp Feature: domain Description: CdiI_3 Location: 371080-371356 bp Feature: domain Description: CdiI_3 Location: 371080-371356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PyrBI_leader (pfam08052), RVT-GII, GIIM (pfam08388), CdiI_3 (pfam18616)