myRT

myRT report for GCA_013867395.1_ASM1386739v1

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Seq: VDFD01001198.1 Cylindrospermopsis raciborskii CS-506_D scaffold114, whole genome shotgun sequence (11379 bp)
Overview 1 RT 1: 3408-8574 bp Neighborhood of RT #1 [3408, 8588] RNR_II_monomer RVT-GII GIIM RTPR DUF3598 Feature: gene Location: 3408-3671 bp Feature: domain Description: RNR_II_monomer Location: 3471-3666 bp Feature: domain Description: RNR_II_monomer Location: 3471 -3666 bp Feature: gene Location: 4101-4253 bp Feature: gene Location: 4280-5593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4457-5054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4457-5054 bp Feature: domain Description: GIIM Note: maturase Location: 5141-5375 bp Feature: domain Description: GIIM Note: maturase Location: 51 41 -5375 bp Feature: gene Location: 5722-7704 bp Feature: domain Description: RTPR Location: 5725-7678 bp Feature: domain Description: RTPR Location: 5725-7678 bp Feature: gene Location: 7734-8588 bp Feature: domain Description: DUF3598 Location: 7743-8574 bp Feature: domain Description: DUF3598 Location: 7743-8574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNR_II_monomer (cd01676), RVT-GII, GIIM (pfam08388), RTPR (TIGR02505), DUF3598 (pfam12204)

Seq: VDFD01001042.1 Cylindrospermopsis raciborskii CS-506_D scaffold127, whole genome shotgun sequence (20636 bp)
Overview 1 RT 1: 11719-16499 bp Neighborhood of RT #1 [11719, 16591] DppC KOG0404 TRX_NTR RVT_N RVT-GII GIIM KOG0404 PulG Feature: gene Location: 11719-12186 bp Feature: domain Description: DppC Location: 11767-12133 bp Feature: domain Description: DppC Location: 11767-12 133 bp Feature: gene Location: 12323-13477 bp Feature: domain Description: KOG0404 Location: 12326-13058 bp Feature: domain Description: KOG0404 Location: 12 32 6-13058 bp Feature: domain Description: TRX_NTR Location: 13178-13463 bp Feature: domain Description: TRX_NTR Location: 13178-13463 bp Feature: gene Location: 13613-15127 bp Feature: RT Description: RVT_N Location: 13697-13883 bp Feature: RT Description: RVT_N Location: 13697-13883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13955-14576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13955-14576 bp Feature: domain Description: GIIM Note: maturase Location: 14699-14921 bp Feature: domain Description: GIIM Note: maturase Location: 14699-1492 1 bp Feature: gene Location: 15781-15969 bp Feature: domain Description: KOG0404 Location: 15811-15958 bp Feature: domain Description: KOG0404 Location: 15811-15958 bp Feature: gene Location: 16184-16591 bp Feature: domain Description: PulG Location: 16238-16499 bp Feature: domain Description: PulG Location: 162 38-16499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DppC (COG1173), KOG0404 (KOG0404, Thioredoxin reductase ), TRX_NTR (cd02949), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PulG (pfam11773)

Seq: VDFD01000347.1 Cylindrospermopsis raciborskii CS-506_D scaffold179, whole genome shotgun sequence (48151 bp)
Overview 1 RT 1: 3089-7388 bp Neighborhood of RT #1 [3089, 7450] RVT_N RVT-GII GIIM QueC MviM Feature: gene Location: 3089-3226 bp Feature: gene Location: 3303-3503 bp Feature: gene Location: 3589-5373 bp Feature: RT Description: RVT_N Location: 3700-3910 bp Feature: RT Description: RVT_N Location: 3 700-3 910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3964-4645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 964-4645 bp Feature: domain Description: GIIM Note: maturase Location: 4744-4978 bp Feature: domain Description: GIIM Note: maturase Location: 4744-4978 bp Feature: gene Location: 5506-6174 bp Feature: domain Description: QueC Location: 5509-6166 bp Feature: domain Description: QueC Location: 5509-6166 bp Feature: gene Location: 6371-7450 bp Feature: domain Description: MviM Location: 6437-7388 bp Feature: domain Description: MviM Location: 643 7-73 88 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), QueC (pfam06508), MviM (COG0673)

Seq: VDFD01000848.1 Cylindrospermopsis raciborskii CS-506_D scaffold40, whole genome shotgun sequence (13447 bp)
Overview 1 RT 1: 4704-8306 bp Neighborhood of RT #1 [4704, 8323] cyt_b559_alpha CpeS RVT_N RVT-GII RVT-GII GIIM CpeS HEAT Feature: gene Location: 4704-4952 bp Feature: domain Description: cyt_b559_alpha Location: 4710-4941 bp Feature: domain Description: cyt_b559_alpha Location: 4 710-4 94 1 bp Feature: gene Location: 5130-5423 bp Feature: domain Description: CpeS Location: 5133-5340 bp Feature: domain Description: CpeS Location: 5133-534 0 bp Feature: gene Location: 5595-6695 bp Feature: RT Description: RVT_N Location: 5631-5802 bp Feature: RT Description: RVT_N Location: 5631-5802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5823-6177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5823-6177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6177-6342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6177-634 2 bp Feature: domain Description: GIIM Note: maturase Location: 6402-6594 bp Feature: domain Description: GIIM Note: maturase Location: 64 02-6594 bp Feature: gene Location: 7247-7513 bp Feature: domain Description: CpeS Location: 7253-7481 bp Feature: domain Description: CpeS Location: 7253-74 81 bp Feature: gene Location: 7652-8323 bp Feature: domain Description: HEAT Location: 7661-8306 bp Feature: domain Description: HEAT Location: 7661-8306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cyt_b559_alpha (TIGR01332), CpeS (pfam09367), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HEAT (sd00044)