myRT

myRT report for GCA_013867425.1_ASM1386742v1

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Seq: VDFF01001114.1 Cylindrospermopsis raciborskii CS-506_B scaffold114, whole genome shotgun sequence (11340 bp)
Overview 1 RT 1: 3405-8572 bp Neighborhood of RT #1 [3405, 8586] RNR_II_monomer RVT-GII GIIM RTPR DUF3598 Feature: gene Location: 3405-3668 bp Feature: domain Description: RNR_II_monomer Location: 3468-3663 bp Feature: domain Description: RNR_II_monomer Location: 3468-3663 bp Feature: gene Location: 4098-4250 bp Feature: gene Location: 4277-5590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4454-5051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4454-5051 bp Feature: domain Description: GIIM Note: maturase Location: 5138-5372 bp Feature: domain Description: GIIM Note: maturase Location: 51 38-5372 bp Feature: gene Location: 5719-7626 bp Feature: domain Description: RTPR Location: 5722-7609 bp Feature: domain Description: RTPR Location: 5722-7609 bp Feature: gene Location: 7732-8586 bp Feature: domain Description: DUF3598 Location: 7741-8572 bp Feature: domain Description: DUF3598 Location: 7741 -8572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNR_II_monomer (cd01676), RVT-GII, GIIM (pfam08388), RTPR (TIGR02505), DUF3598 (pfam12204)

Seq: VDFF01000979.1 Cylindrospermopsis raciborskii CS-506_B scaffold127, whole genome shotgun sequence (20557 bp)
Overview 1 RT 1: 11694-16474 bp Neighborhood of RT #1 [11694, 16566] DppC KOG0404 TRX_NTR RVT_N RVT-GII GIIM KOG0404 PulG Feature: gene Location: 11694-12161 bp Feature: domain Description: DppC Location: 11742-12105 bp Feature: domain Description: DppC Location: 11742 -12 105 bp Feature: gene Location: 12298-13452 bp Feature: domain Description: KOG0404 Location: 12301-13033 bp Feature: domain Description: KOG0404 Location: 12 301-13033 bp Feature: domain Description: TRX_NTR Location: 13153-13438 bp Feature: domain Description: TRX_NTR Location: 13153-13438 bp Feature: gene Location: 13612-15102 bp Feature: RT Description: RVT_N Location: 13696-13882 bp Feature: RT Description: RVT_N Location: 13696-13882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13954-14575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13954-14575 bp Feature: domain Description: GIIM Note: maturase Location: 14698-14920 bp Feature: domain Description: GIIM Note: maturase Location: 14698-1492 0 bp Feature: gene Location: 15756-15944 bp Feature: domain Description: KOG0404 Location: 15786-15933 bp Feature: domain Description: KOG0404 Location: 15786-15933 bp Feature: gene Location: 16159-16566 bp Feature: domain Description: PulG Location: 16213-16474 bp Feature: domain Description: PulG Location: 162 13-16474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DppC (COG1173), KOG0404 (KOG0404, Thioredoxin reductase ), TRX_NTR (cd02949), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PulG (pfam11773)

Seq: VDFF01000324.1 Cylindrospermopsis raciborskii CS-506_B scaffold179, whole genome shotgun sequence (45990 bp)
Overview 1 RT 1: 978-5277 bp Neighborhood of RT #1 [978, 5339] RVT_N RVT-GII GIIM QueC MviM Feature: gene Location: 978-1115 bp Feature: gene Location: 1192-1392 bp Feature: gene Location: 1562-3262 bp Feature: RT Description: RVT_N Location: 1589-1799 bp Feature: RT Description: RVT_N Location: 1589-1799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853-2534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853 -253 4 bp Feature: domain Description: GIIM Note: maturase Location: 2633-2867 bp Feature: domain Description: GIIM Note: maturase Location: 263 3 -2867 bp Feature: gene Location: 3395-4063 bp Feature: domain Description: QueC Location: 3398-4055 bp Feature: domain Description: QueC Location: 3 3 98-4055 bp Feature: gene Location: 4260-5339 bp Feature: domain Description: MviM Location: 4326-5277 bp Feature: domain Description: MviM Location: 43 26-5277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), QueC (pfam06508), MviM (COG0673)

Seq: VDFF01000797.1 Cylindrospermopsis raciborskii CS-506_B scaffold40, whole genome shotgun sequence (13424 bp)
Overview 1 RT 1: 4665-8264 bp Neighborhood of RT #1 [4665, 8281] cyt_b559_alpha CpeS RVT_N RVT-GII RVT-GII GIIM CpeS HEAT Feature: gene Location: 4665-4913 bp Feature: domain Description: cyt_b559_alpha Location: 4671-4902 bp Feature: domain Description: cyt_b559_alpha Location: 4 671-4 902 bp Feature: gene Location: 5101-5382 bp Feature: domain Description: CpeS Location: 5104-5311 bp Feature: domain Description: CpeS Location: 5104 -5311 bp Feature: gene Location: 5554-6654 bp Feature: RT Description: RVT_N Location: 5590-5761 bp Feature: RT Description: RVT_N Location: 5590-5761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5782-6136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5782-6136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6136-6301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6136-6301 bp Feature: domain Description: GIIM Note: maturase Location: 6361-6553 bp Feature: domain Description: GIIM Note: maturase Location: 6361-6553 bp Feature: gene Location: 7205-7471 bp Feature: domain Description: CpeS Location: 7211-7439 bp Feature: domain Description: CpeS Location: 7211-74 39 bp Feature: gene Location: 7610-8281 bp Feature: domain Description: HEAT Location: 7619-8264 bp Feature: domain Description: HEAT Location: 7619-8264 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cyt_b559_alpha (TIGR01332), CpeS (pfam09367), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HEAT (sd00044)