myRT

myRT report for GCA_013867505.1_ASM1386750v1

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Seq: JACENG010000022.1 Bacteroides fragilis strain BFR_KZ05 NODE_22_length_103677_cov_20.956581, whole genome shotgun sequence (103677 bp)
Overview 1 RT 1: 28168-30184 bp Neighborhood of RT #1 [28168, 30184] RVT-GII HTH_28 Feature: gene Location: 28168-28530 bp Feature: gene Location: 28534-28743 bp Feature: gene Location: 28773-28970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28776-28968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28776-28968 bp Feature: gene Location: 29091-29381 bp Feature: domain Description: HTH_28 Location: 29115-29262 bp Feature: domain Description: HTH_28 Location: 291 1 5-29262 bp Feature: gene Location: 29810-30184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_28 (pfam13518)

Seq: JACENG010000006.1 Bacteroides fragilis strain BFR_KZ05 NODE_6_length_228349_cov_19.938437, whole genome shotgun sequence (228349 bp)
Overview 1 RT 1: 55393-59484 bp Neighborhood of RT #1 [55393, 59513] DUF4141 RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_J Feature: gene Location: 55393-55620 bp Feature: domain Description: DUF4141 Location: 55405-55561 bp Feature: domain Description: DUF4141 Location: 55405-55561 bp Feature: gene Location: 55660-55821 bp Feature: gene Location: 56141-57976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56435-57257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56435-572 57 bp Feature: domain Description: Intron_maturas2 Location: 57416-57785 bp Feature: domain Description: Intron_maturas2 Location: 57416-57785 bp Feature: domain Description: HNHc Note: nucleases Location: 57809-57950 bp Feature: domain Description: HNHc Note: nucleases Location: 57809-57950 bp Feature: gene Location: 57969-58505 bp Feature: gene Location: 58509-59513 bp Feature: domain Description: Bac_Flav_CT_J Location: 58518-59484 bp Feature: domain Description: Bac_Flav_CT_J Location: 58518-59484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4141 (pfam13605), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_J (TIGR03782)

Seq: JACENG010000007.1 Bacteroides fragilis strain BFR_KZ05 NODE_7_length_215488_cov_19.940681, whole genome shotgun sequence (215488 bp)
Overview 1 RT 1: 88206-97170 bp Neighborhood of RT #1 [88206, 97172] RNase_Z rpsA RVT-Retrons GlnA3 Feature: gene Location: 88206-89120 bp Feature: domain Description: RNase_Z Location: 88221-89112 bp Feature: domain Description: RNase_Z Location: 88221-89112 bp Feature: gene Location: 89270-91063 bp Feature: domain Description: rpsA Location: 89348-90956 bp Feature: domain Description: rpsA Location: 893 48-90956 bp Feature: gene Location: 91205-92317 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 91520-92069 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 91520-92069 bp Feature: gene Location: 92524-94743 bp Feature: gene Location: 94983-97172 bp Feature: domain Description: GlnA3 Location: 95058-97170 bp Feature: domain Description: GlnA3 Location: 95058-97170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_Z (TIGR02651), rpsA (TIGR00717), RVT-Retrons, GlnA3 (COG3968)