myRT

myRT report for GCA_013912565.1_ASM1391256v1

Download annotations/find similar RTs

Seq: JACEOY010000029.1 Pseudomonas aeruginosa strain PAL1.56 NODE_29_length_68375_cov_14.0178, whole genome shotgun sequence (68375 bp)
Overview 1 RT 1: 31057-33209 bp Neighborhood of RT #1 [31057, 33742] HipB RVT-UG17 Feature: gene Location: 31057-31338 bp Feature: domain Description: HipB Location: 31078-31312 bp Feature: domain Description: HipB Location: 31 078-31 31 2 bp Feature: gene Location: 31424-31849 bp Feature: gene Location: 32378-33742 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 32606-33209 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 32606-33209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipB (COG1396), RVT-UG17

Seq: JACEOY010000032.1 Pseudomonas aeruginosa strain PAL1.56 NODE_32_length_52572_cov_13.9694, whole genome shotgun sequence (52572 bp)
Overview 1 RT 1: 34956-39252 bp Neighborhood of RT #1 [34956, 39335] RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 34956-35135 bp Feature: gene Location: 35319-35717 bp Feature: gene Location: 35867-37135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36080-36737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36080-36737 bp Feature: domain Description: GIIM Note: maturase Location: 36815-37037 bp Feature: domain Description: GIIM Note: maturase Location: 36815-37037 bp Feature: gene Location: 37524-38165 bp Feature: domain Description: DUF772 Location: 37674-37869 bp Feature: domain Description: DUF772 Location: 37674-37869 bp Feature: gene Location: 38508-39335 bp Feature: domain Description: ABC_phnC Location: 38538-39252 bp Feature: domain Description: ABC_phnC Location: 38538-392 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), ABC_phnC (TIGR02315)