myRT

myRT report for GCA_013913335.1_ASM1391333v1

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Seq: JACEQK010000037.1 Pseudomonas aeruginosa strain PAL1.12 NODE_37_length_28153_cov_13.4053, whole genome shotgun sequence (28153 bp)
Overview 1 RT 1: 12087-17419 bp Neighborhood of RT #1 [12087, 17616] umuC HTH_31 RVT-UG7 POD-like_MBL-fold Feature: gene Location: 12087-13172 bp Feature: domain Description: umuC Location: 12150-13170 bp Feature: domain Description: umuC Location: 1 21 50-1 31 70 bp Feature: gene Location: 13310-14395 bp Feature: domain Description: HTH_31 Location: 14213-14306 bp Feature: domain Description: HTH_31 Location: 1 421 3-1 4306 bp Feature: gene Location: 14762-15676 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 15143-15557 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 51 43-1 5557 bp Feature: gene Location: 16336-16629 bp Feature: gene Location: 16813-17616 bp Feature: domain Description: POD-like_MBL-fold Location: 16828-17419 bp Feature: domain Description: POD-like_MBL-fold Location: 1 6828-1 741 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), HTH_31 (pfam13560), RVT-UG7, POD-like_MBL-fold (cd07724)

Seq: JACEQK010000057.1 Pseudomonas aeruginosa strain PAL1.12 NODE_57_length_1858_cov_33.7071, whole genome shotgun sequence (1858 bp)
Overview 1 RT 1: 65-1857 bp Neighborhood of RT #1 [65, 1857] RVT-GII GIIM Feature: gene Location: 65-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 78-935 bp Feature: domain Description: GIIM Note: maturase Location: 1013-1235 bp Feature: domain Description: GIIM Note: maturase Location: 1013-12 35 bp Feature: gene Location: 1684-1857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)