myRT

myRT report for GCA_013913485.1_ASM1391348v1

Download annotations/find similar RTs

Seq: JACEQS010000026.1 Pseudomonas aeruginosa strain PAL1.4 NODE_26_length_85195_cov_17.5781, whole genome shotgun sequence (85195 bp)
Overview 1 RT 1: 45863-50242 bp Neighborhood of RT #1 [45863, 50242] ABC_phnC DUF772 RVT-GII GIIM Feature: gene Location: 45863-46690 bp Feature: domain Description: ABC_phnC Location: 45893-46607 bp Feature: domain Description: ABC_phnC Location: 45893-46607 bp Feature: gene Location: 47033-47674 bp Feature: domain Description: DUF772 Location: 47183-47378 bp Feature: domain Description: DUF772 Location: 471 83-47378 bp Feature: gene Location: 48063-49331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48276-48933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48276-48933 bp Feature: domain Description: GIIM Note: maturase Location: 49011-49233 bp Feature: domain Description: GIIM Note: maturase Location: 4901 1 -49233 bp Feature: gene Location: 49481-49879 bp Feature: gene Location: 50063-50242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_phnC (TIGR02315), DUF772 (pfam05598), RVT-GII, GIIM (pfam08388)

Seq: JACEQS010000027.1 Pseudomonas aeruginosa strain PAL1.4 NODE_27_length_84880_cov_15.9747, whole genome shotgun sequence (84880 bp)
Overview 1 RT 1: 47562-49714 bp Neighborhood of RT #1 [47562, 50247] HipB RVT-UG17 Feature: gene Location: 47562-47843 bp Feature: domain Description: HipB Location: 47583-47817 bp Feature: domain Description: HipB Location: 47583-47817 bp Feature: gene Location: 47929-48354 bp Feature: gene Location: 48883-50247 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 49111-49714 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 49111-49714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipB (COG1396), RVT-UG17