myRT

myRT report for GCA_014042125.1_ASM1404212v1

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Seq: JABXSH010000013.1 Escherichia fergusonii strain RHB37-C09 RHB37-C09_13, whole genome shotgun sequence (86576 bp)
Overview 1 RT 1: 10297-17075 bp Neighborhood of RT #1 [10297, 17080] RVT_N RVT-GII GIIM HNHc RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 10297-10488 bp Feature: gene Location: 10559-10693 bp Feature: gene Location: 10766-12433 bp Feature: RT Description: RVT_N Location: 10814-11051 bp Feature: RT Description: RVT_N Location: 1 081 4-1 1 051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11102-11744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 02-1 1 744 bp Feature: domain Description: GIIM Note: maturase Location: 11795-12029 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 795-1 2029 bp Feature: domain Description: HNHc Note: nucleases Location: 12239-12398 bp Feature: domain Description: HNHc Note: nucleases Location: 1 2239-1 2398 bp Feature: gene Location: 12449-12586 bp Feature: gene Location: 12713-12895 bp Feature: gene Location: 13007-13690 bp Feature: gene Location: 13909-14118 bp Feature: gene Location: 14253-16154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14520-15351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4520-1 5351 bp Feature: domain Description: Intron_maturas2 Location: 15465-15723 bp Feature: domain Description: Intron_maturas2 Location: 1 5465-1 5723 bp Feature: domain Description: HNHc Note: nucleases Location: 15897-16059 bp Feature: domain Description: HNHc Note: nucleases Location: 1 5897-1 6059 bp Feature: gene Location: 16349-16789 bp Feature: domain Description: PRK13732 Location: 16355-16787 bp Feature: domain Description: PRK1 3732 Location: 1 6355-1 6787 bp Feature: gene Location: 16847-17080 bp Feature: domain Description: DUF905 Location: 16877-17075 bp Feature: domain Description: DUF905 Location: 1 6877-1 7075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Intron_maturas2 (pfam01348), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: JABXSH010000002.1 Escherichia fergusonii strain RHB37-C09 RHB37-C09_2, whole genome shotgun sequence (839108 bp)
Overview 1 RT 1: 759358-763238 bp Neighborhood of RT #1 [759358, 763243] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 759358-760074 bp Feature: domain Description: rph Location: 759361-760069 bp Feature: domain Description: rph Location: 759361-760069 bp Feature: gene Location: 760125-760781 bp Feature: domain Description: pyrE Location: 760143-760776 bp Feature: domain Description: pyrE Location: 760143-760776 bp Feature: gene Location: 761079-762038 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 761214-761763 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7612 14-761763 bp Feature: gene Location: 762082-762678 bp Feature: domain Description: slmA Location: 762088-762664 bp Feature: domain Description: slmA Location: 762 088-762 664 bp Feature: gene Location: 762785-763243 bp Feature: domain Description: dut Location: 762791-763238 bp Feature: domain Description: dut Location: 762 791-7632 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)