myRT

myRT report for GCA_014042145.1_ASM1404214v1

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Seq: JABXSL010000001.1 Escherichia fergusonii strain RHB37-C01 RHB37-C01_1, whole genome shotgun sequence (839721 bp)
Overview 1 RT 1: 759971-763851 bp Neighborhood of RT #1 [759971, 763856] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 759971-760687 bp Feature: domain Description: rph Location: 759974-760682 bp Feature: domain Description: rph Location: 759974-760682 bp Feature: gene Location: 760738-761394 bp Feature: domain Description: pyrE Location: 760756-761389 bp Feature: domain Description: pyrE Location: 760756-761 389 bp Feature: gene Location: 761692-762651 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 761827-762376 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 761 827-762376 bp Feature: gene Location: 762695-763291 bp Feature: domain Description: slmA Location: 762701-763277 bp Feature: domain Description: slmA Location: 762701 -763277 bp Feature: gene Location: 763398-763856 bp Feature: domain Description: dut Location: 763404-763851 bp Feature: domain Description: dut Location: 763404-763851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: JABXSL010000015.1 Escherichia fergusonii strain RHB37-C01 RHB37-C01_15, whole genome shotgun sequence (82611 bp)
Overview 1 RT 1: 70594-77377 bp Neighborhood of RT #1 [70594, 77377] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc RVT_N RVT-GII GIIM HNHc Feature: gene Location: 70594-70827 bp Feature: domain Description: DUF905 Location: 70624-70822 bp Feature: domain Description: DUF905 Location: 7062 4-7082 2 bp Feature: gene Location: 70885-71325 bp Feature: domain Description: PRK13732 Location: 70891-71323 bp Feature: domain Description: PRK13732 Location: 70891-7132 3 bp Feature: gene Location: 71520-73421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71787-72618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71787-72 618 bp Feature: domain Description: Intron_maturas2 Location: 72732-72990 bp Feature: domain Description: Intron_maturas2 Location: 72 732 -72 990 bp Feature: domain Description: HNHc Note: nucleases Location: 73164-73326 bp Feature: domain Description: HNHc Note: nucleases Location: 73164-7332 6 bp Feature: gene Location: 73984-74667 bp Feature: gene Location: 75241-76908 bp Feature: RT Description: RVT_N Location: 75289-75526 bp Feature: RT Description: RVT_N Location: 752 89-7552 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75577-76219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75577-762 19 bp Feature: domain Description: GIIM Note: maturase Location: 76270-76504 bp Feature: domain Description: GIIM Note: maturase Location: 762 70-76504 bp Feature: domain Description: HNHc Note: nucleases Location: 76714-76873 bp Feature: domain Description: HNHc Note: nucleases Location: 76714-76873 bp Feature: gene Location: 76886-77071 bp Feature: gene Location: 77186-77377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RVT_N (pfam13655), GIIM (pfam08388)