myRT

myRT report for GCA_014042225.1_ASM1404222v1

Download annotations/find similar RTs

Seq: JACFXZ010000001.1 Pectobacterium aroidearum strain KC20 1, whole genome shotgun sequence (1334450 bp)
Overview 1 RT 1: 841198-844000 bp Neighborhood of RT #1 [841198, 844000] ParE COG3905 RVT-UG2 Feature: gene Location: 841198-841482 bp Feature: domain Description: ParE Location: 841204-841477 bp Feature: domain Description: ParE Location: 841 204-841 477 bp Feature: gene Location: 841472-841717 bp Feature: domain Description: COG3905 Location: 841475-841691 bp Feature: domain Description: COG3905 Location: 841 475-841 691 bp Feature: gene Location: 842008-843294 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 842209-843001 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 842209-843001 bp Feature: gene Location: 843410-843571 bp Feature: gene Location: 843851-844000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), COG3905 (Predicted transcriptional regulator ), RVT-UG2

Seq: JACFXZ010000002.1 Pectobacterium aroidearum strain KC20 2, whole genome shotgun sequence (1128725 bp)
Overview 1 RT 1: 240078-243669 bp Neighborhood of RT #1 [240078, 243800] RVT-Retrons INT_P4_C PRK09692 Feature: gene Location: 240078-240287 bp Feature: gene Location: 240617-240850 bp Feature: gene Location: 240895-242157 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 241117-241699 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 41117-2 41699 bp Feature: gene Location: 242869-243468 bp Feature: domain Description: INT_P4_C Location: 242941-243457 bp Feature: domain Description: INT_P4_C Location: 2 42 941-2 43457 bp Feature: gene Location: 243480-243800 bp Feature: domain Description: PRK09692 Location: 243486-243669 bp Feature: domain Description: PRK09692 Location: 2 43486-2 43669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, INT_P4_C (cd00801), PRK09692 (Integrase; provisional)