myRT

myRT report for GCA_014042405.1_ASM1404240v1

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Seq: JACFSY010000004.1 Bacteroides fragilis strain BFR_KZ12 NODE_4_length_339635_cov_21.962787, whole genome shotgun sequence (339635 bp)
Overview 1 RT 1: 4660-6676 bp Neighborhood of RT #1 [4660, 6676] RVT-GII HTH_28 Feature: gene Location: 4660-5022 bp Feature: gene Location: 5026-5235 bp Feature: gene Location: 5265-5462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5268-5460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5268-5460 bp Feature: gene Location: 5583-5873 bp Feature: domain Description: HTH_28 Location: 5607-5754 bp Feature: domain Description: HTH_28 Location: 5607-5754 bp Feature: gene Location: 6302-6676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_28 (pfam13518)

Seq: JACFSY010000005.1 Bacteroides fragilis strain BFR_KZ12 NODE_5_length_325615_cov_21.426907, whole genome shotgun sequence (325615 bp)
Overview 1 RT 1: 198333-207297 bp Neighborhood of RT #1 [198333, 207299] RNase_Z rpsA RVT-Retrons GlnA3 Feature: gene Location: 198333-199247 bp Feature: domain Description: RNase_Z Location: 198348-199239 bp Feature: domain Description: RNase_Z Location: 198348-1992 39 bp Feature: gene Location: 199397-201190 bp Feature: domain Description: rpsA Location: 199475-201083 bp Feature: domain Description: rpsA Location: 199475-2 01083 bp Feature: gene Location: 201332-202444 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 201647-202196 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 01647-2 02 196 bp Feature: gene Location: 202651-204870 bp Feature: gene Location: 205110-207299 bp Feature: domain Description: GlnA3 Location: 205185-207297 bp Feature: domain Description: GlnA3 Location: 2 05185-2 072 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_Z (TIGR02651), rpsA (TIGR00717), RVT-Retrons, GlnA3 (COG3968)