myRT

myRT report for GCA_014042505.1_ASM1404250v1

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Seq: JACFSS010000002.1 Bacteroides fragilis strain BFR_KZ06 NODE_2_length_627570_cov_21.794941, whole genome shotgun sequence (627570 bp)
Overview 1 RT 1: 276054-279196 bp Neighborhood of RT #1 [276054, 279213] DUF4133 DUF4134 RVT-GII Intron_maturas2 HNHc DUF4134 Feature: gene Location: 276054-276350 bp Feature: domain Description: DUF4133 Location: 276096-276273 bp Feature: domain Description: DUF41 33 Location: 276096-276273 bp Feature: gene Location: 276363-276557 bp Feature: domain Description: DUF4134 Location: 276453-276543 bp Feature: domain Description: DUF41 34 Location: 276453-276543 bp Feature: gene Location: 276582-278393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276846-277668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276846-277668 bp Feature: domain Description: Intron_maturas2 Location: 277857-278067 bp Feature: domain Description: Intron_maturas2 Location: 277857-278067 bp Feature: domain Description: HNHc Note: nucleases Location: 278217-278322 bp Feature: domain Description: HNHc Note: nucleases Location: 27821 7-278322 bp Feature: gene Location: 278573-278923 bp Feature: gene Location: 278935-279213 bp Feature: domain Description: DUF4134 Location: 278995-279196 bp Feature: domain Description: DUF41 34 Location: 278995-2791 96 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4133 (pfam13571), DUF4134 (pfam13572), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JACFSS010000006.1 Bacteroides fragilis strain BFR_KZ06 NODE_6_length_317336_cov_23.992144, whole genome shotgun sequence (317336 bp)
Overview 1 RT 1: 202577-211541 bp Neighborhood of RT #1 [202577, 211543] RNase_Z rpsA RVT-Retrons GlnA3 Feature: gene Location: 202577-203491 bp Feature: domain Description: RNase_Z Location: 202592-203483 bp Feature: domain Description: RNase_Z Location: 2 02 592 -2 03483 bp Feature: gene Location: 203641-205434 bp Feature: domain Description: rpsA Location: 203719-205327 bp Feature: domain Description: rpsA Location: 2 03719-2 0532 7 bp Feature: gene Location: 205576-206688 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 205891-206440 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 05891-2 06440 bp Feature: gene Location: 206895-209114 bp Feature: gene Location: 209354-211543 bp Feature: domain Description: GlnA3 Location: 209429-211541 bp Feature: domain Description: GlnA3 Location: 2 0942 9-2 11541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_Z (TIGR02651), rpsA (TIGR00717), RVT-Retrons, GlnA3 (COG3968)

Seq: JACFSS010000009.1 Bacteroides fragilis strain BFR_KZ06 NODE_9_length_270640_cov_19.953071, whole genome shotgun sequence (270640 bp)
Overview 1 RT 1: 141844-145726 bp Neighborhood of RT #1 [141844, 145746] Avd_like RVT-DGRs YbdN Feature: gene Location: 141844-142215 bp Feature: domain Description: Avd_like Location: 141871-142174 bp Feature: domain Description: Avd_like Location: 141871-142174 bp Feature: gene Location: 142348-142560 bp Feature: gene Location: 142685-143995 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 142892-143606 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 142892-143 606 bp Feature: gene Location: 144019-144465 bp Feature: gene Location: 144487-145746 bp Feature: domain Description: YbdN Location: 144493-145726 bp Feature: domain Description: YbdN Location: 144493 -145726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, YbdN (COG3969)