myRT

myRT report for GCA_014062085.1_ASM1406208v1

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Seq: JACGCU010000136.1 Pseudomonas juntendi strain 14535 NODE_136_length_1921_cov_184.146042, whole genome shotgun sequence (1921 bp)
Overview 1 RT 1: 108-1683 bp Neighborhood of RT #1 [108, 1850] RVT-GII GIIM Feature: gene Location: 108-293 bp Feature: gene Location: 459-1850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786-1401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786-1 401 bp Feature: domain Description: GIIM Note: maturase Location: 1455-1683 bp Feature: domain Description: GIIM Note: maturase Location: 1 455-1 683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACGCU010000025.1 Pseudomonas juntendi strain 14535 NODE_25_length_80132_cov_46.652372, whole genome shotgun sequence (80132 bp)
Overview 1 RT 1: 28460-33375 bp Neighborhood of RT #1 [28460, 33375] RVT-GII PRK06850 Feature: gene Location: 28460-28708 bp Feature: gene Location: 29349-29681 bp Feature: gene Location: 29851-31647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30565-31255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30565-312 55 bp Feature: gene Location: 31703-33145 bp Feature: domain Description: PRK06850 Location: 31874-32852 bp Feature: domain Description: PRK06850 Location: 31874-32 852 bp Feature: gene Location: 33202-33375 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK06850 (hypothetical protein; Provisional)

Seq: JACGCU010000048.1 Pseudomonas juntendi strain 14535 NODE_48_length_42847_cov_46.851404, whole genome shotgun sequence (42847 bp)
Overview 1 RT 1: 3604-6744 bp Neighborhood of RT #1 [3604, 6744] RVT-GII GIIM Feature: gene Location: 3604-3732 bp Feature: gene Location: 3969-4307 bp Feature: gene Location: 4673-6094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5030-5645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 503 0-5645 bp Feature: domain Description: GIIM Note: maturase Location: 5702-5927 bp Feature: domain Description: GIIM Note: maturase Location: 5702-5927 bp Feature: gene Location: 6229-6414 bp Feature: gene Location: 6562-6744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACGCU010000008.1 Pseudomonas juntendi strain 14535 NODE_8_length_153515_cov_36.854004, whole genome shotgun sequence (153515 bp)
Overview 1 RT 1: 124793-127940 bp Neighborhood of RT #1 [124793, 127954] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 124793-124924 bp Feature: gene Location: 124930-125535 bp Feature: gene Location: 125617-126774 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 125866-126550 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 125866-126550 bp Feature: gene Location: 126973-127326 bp Feature: domain Description: Avd_like Location: 127000-127306 bp Feature: domain Description: Avd_like Location: 127000-127306 bp Feature: gene Location: 127379-127954 bp Feature: domain Description: DUF1566 Location: 127709-127940 bp Feature: domain Description: DUF1566 Location: 127709-12794 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)