myRT

myRT report for GCA_014062185.1_ASM1406218v1

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Seq: JACGCY010000001.1 Pseudomonas juntendi strain 12349 NODE_1_length_419137_cov_42.281666, whole genome shotgun sequence (419137 bp)
Overview 1 RT 1: 79097-84960 bp Neighborhood of RT #1 [79097, 84960] PFDH_like IS5 RVT-GII GIIM IS5 Feature: gene Location: 79097-80311 bp Feature: domain Description: PFDH_like Location: 79115-80291 bp Feature: domain Description: PFDH_like Location: 791 1 5-80291 bp Feature: gene Location: 80776-81315 bp Feature: domain Description: IS5 Location: 80965-81292 bp Feature: domain Description: IS5 Location: 80965-81 292 bp Feature: gene Location: 81810-83063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82023-82680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82023-82680 bp Feature: domain Description: GIIM Note: maturase Location: 82758-82980 bp Feature: domain Description: GIIM Note: maturase Location: 82758-82980 bp Feature: gene Location: 83149-83607 bp Feature: domain Description: IS5 Location: 83152-83575 bp Feature: domain Description: IS5 Location: 831 52-83575 bp Feature: gene Location: 84805-84960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PFDH_like (cd08282), IS5 (COG3039), RVT-GII, GIIM (pfam08388)

Seq: JACGCY010000053.1 Pseudomonas juntendi strain 12349 NODE_53_length_34951_cov_52.002843, whole genome shotgun sequence (34951 bp)
Overview 1 RT 1: 190-5923 bp Neighborhood of RT #1 [190, 5928] RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Feature: gene Location: 190-1560 bp Feature: gene Location: 2115-3707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2619-3309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 619-3309 bp Feature: gene Location: 4015-5550 bp Feature: domain Description: LZ_Tnp_IS66 Location: 4123-4336 bp Feature: domain Description: LZ_Tnp_IS66 Location: 412 3-4336 bp Feature: domain Description: zf-IS66 Location: 4366-4489 bp Feature: domain Description: zf-IS66 Location: 4366-4489 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4534-5389 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4534-5389 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 5410-5524 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 5410-552 4 bp Feature: gene Location: 5704-5928 bp Feature: domain Description: TnpB_IS66 Location: 5734-5923 bp Feature: domain Description: TnpB_IS66 Location: 5734-592 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717)