myRT

myRT report for GCA_014062315.1_ASM1406231v1

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Seq: JACGLT010000001.1 Gelidibacter sp. F6074 scaffold_1, whole genome shotgun sequence (545684 bp)
Overview 1 RT 1: 543849-545496 bp Neighborhood of RT #1 [543849, 545597] RVT-GII GIIM Feature: gene Location: 543849-543986 bp Feature: gene Location: 544054-544194 bp Feature: gene Location: 544335-545597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 544548-545208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 544548-545208 bp Feature: domain Description: GIIM Note: maturase Location: 545292-545496 bp Feature: domain Description: GIIM Note: maturase Location: 545292-545496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACGLT010000010.1 Gelidibacter sp. F6074 scaffold_10, whole genome shotgun sequence (173626 bp)
Overview 1 RT 1: 170124-173559 bp Neighborhood of RT #1 [170124, 173559] RVT-GII GIIM Feature: gene Location: 170124-170627 bp Feature: gene Location: 171003-171506 bp Feature: gene Location: 171811-173073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172024-172684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 02 4-172 684 bp Feature: domain Description: GIIM Note: maturase Location: 172768-172972 bp Feature: domain Description: GIIM Note: maturase Location: 172 768-172 972 bp Feature: gene Location: 173214-173354 bp Feature: gene Location: 173422-173559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACGLT010000018.1 Gelidibacter sp. F6074 scaffold_18, whole genome shotgun sequence (78659 bp)
Overview 1 RT 1: 83-2669 bp Neighborhood of RT #1 [83, 2713] RVT-GII GIIM PIN_VapC-like Feature: gene Location: 83-1423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338-953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 8-953 bp Feature: domain Description: GIIM Note: maturase Location: 1028-1238 bp Feature: domain Description: GIIM Note: maturase Location: 1028-123 8 bp Feature: gene Location: 2058-2303 bp Feature: gene Location: 2300-2713 bp Feature: domain Description: PIN_VapC-like Location: 2315-2669 bp Feature: domain Description: PIN_VapC-like Location: 23 15-2669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PIN_VapC-like (cd18715)

Seq: JACGLT010000019.1 Gelidibacter sp. F6074 scaffold_19, whole genome shotgun sequence (77643 bp)
Overview 1 RT 1: 75808-77455 bp Neighborhood of RT #1 [75808, 77556] RVT-GII GIIM Feature: gene Location: 75808-75945 bp Feature: gene Location: 76013-76153 bp Feature: gene Location: 76294-77556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76507-77167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76507-77167 bp Feature: domain Description: GIIM Note: maturase Location: 77251-77455 bp Feature: domain Description: GIIM Note: maturase Location: 77251-774 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACGLT010000023.1 Gelidibacter sp. F6074 scaffold_23, whole genome shotgun sequence (49740 bp)
Overview 1 RT 1: 46864-49673 bp Neighborhood of RT #1 [46864, 49673] NERD Imm_superinfect RVT-GII GIIM Feature: gene Location: 46864-47583 bp Feature: domain Description: NERD Location: 47011-47338 bp Feature: domain Description: NERD Location: 47011-47338 bp Feature: gene Location: 47567-47770 bp Feature: domain Description: Imm_superinfect Location: 47630-47753 bp Feature: domain Description: Imm_superinfect Location: 47630-4775 3 bp Feature: gene Location: 47925-49187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48138-48798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48138-48798 bp Feature: domain Description: GIIM Note: maturase Location: 48882-49086 bp Feature: domain Description: GIIM Note: maturase Location: 48882-49086 bp Feature: gene Location: 49328-49468 bp Feature: gene Location: 49536-49673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NERD (pfam08378), Imm_superinfect (pfam14373), RVT-GII, GIIM (pfam08388)

Seq: JACGLT010000024.1 Gelidibacter sp. F6074 scaffold_24, whole genome shotgun sequence (48071 bp)
Overview 1 RT 1: 287-4092 bp Neighborhood of RT #1 [287, 4127] RVT-GII GIIM CzcO MSMEG_0569_nitr Feature: gene Location: 287-457 bp Feature: gene Location: 501-1781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 696-1311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 96 -1311 bp Feature: domain Description: GIIM Note: maturase Location: 1386-1596 bp Feature: domain Description: GIIM Note: maturase Location: 1386 -1596 bp Feature: gene Location: 1875-2690 bp Feature: gene Location: 3078-4127 bp Feature: domain Description: CzcO Location: 3084-3732 bp Feature: domain Description: CzcO Location: 3084-3732 bp Feature: domain Description: MSMEG_0569_nitr Location: 3879-4092 bp Feature: domain Description: MSMEG_056 9_nitr Location: 3879-4092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), CzcO (COG2072), MSMEG_0569_nitr (TIGR04046)

Seq: JACGLT010000025.1 Gelidibacter sp. F6074 scaffold_25, whole genome shotgun sequence (45469 bp)
Overview 1 RT 1: 68-2714 bp Neighborhood of RT #1 [68, 2716] RVT-GII GIIM HicB YcfA Feature: gene Location: 68-205 bp Feature: gene Location: 273-413 bp Feature: gene Location: 554-1816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 767-1427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 67 -1427 bp Feature: domain Description: GIIM Note: maturase Location: 1511-1715 bp Feature: domain Description: GIIM Note: maturase Location: 1511-17 15 bp Feature: gene Location: 1993-2427 bp Feature: domain Description: HicB Location: 2035-2182 bp Feature: domain Description: HicB Location: 2035-2182 bp Feature: gene Location: 2534-2716 bp Feature: domain Description: YcfA Location: 2537-2714 bp Feature: domain Description: YcfA Location: 2537 -27 14 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HicB (pfam05534), YcfA (COG1724)

Seq: JACGLT010000031.1 Gelidibacter sp. F6074 scaffold_31, whole genome shotgun sequence (9942 bp)
Overview 1 RT 1: 8037-9935 bp Neighborhood of RT #1 [8037, 9940] RVT-GII GIIM Por_Secre_tail Feature: gene Location: 8037-8183 bp Feature: gene Location: 8196-8327 bp Feature: gene Location: 8541-9203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8544-8754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 544-8 754 bp Feature: domain Description: GIIM Note: maturase Location: 8805-9018 bp Feature: domain Description: GIIM Note: maturase Location: 8 8 05-9018 bp Feature: gene Location: 9259-9399 bp Feature: gene Location: 9713-9940 bp Feature: domain Description: Por_Secre_tail Location: 9716-9935 bp Feature: domain Description: Por_Secre_tail Location: 9716-9935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Por_Secre_tail (TIGR04183)

Seq: JACGLT010000032.1 Gelidibacter sp. F6074 scaffold_32, whole genome shotgun sequence (9358 bp)
Overview 1 RT 1: 7523-9170 bp Neighborhood of RT #1 [7523, 9271] RVT-GII GIIM Feature: gene Location: 7523-7660 bp Feature: gene Location: 7728-7868 bp Feature: gene Location: 8009-9271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8222-8882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8222-8882 bp Feature: domain Description: GIIM Note: maturase Location: 8966-9170 bp Feature: domain Description: GIIM Note: maturase Location: 89 66-9 170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACGLT010000033.1 Gelidibacter sp. F6074 scaffold_33, whole genome shotgun sequence (7988 bp)
Overview 1 RT 1: 83-3036 bp Neighborhood of RT #1 [83, 3036] RVT-GII GIIM Feature: gene Location: 83-1423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338-953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338-953 bp Feature: domain Description: GIIM Note: maturase Location: 1028-1238 bp Feature: domain Description: GIIM Note: maturase Location: 10 28-1238 bp Feature: gene Location: 1909-2076 bp Feature: gene Location: 2077-3036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACGLT010000036.1 Gelidibacter sp. F6074 scaffold_36, whole genome shotgun sequence (5549 bp)
Overview 1 RT 1: 3714-5361 bp Neighborhood of RT #1 [3714, 5462] RVT-GII GIIM Feature: gene Location: 3714-3851 bp Feature: gene Location: 3919-4059 bp Feature: gene Location: 4200-5462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4413-5073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4413-5073 bp Feature: domain Description: GIIM Note: maturase Location: 5157-5361 bp Feature: domain Description: GIIM Note: maturase Location: 5157-5361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)