myRT

myRT report for GCA_014076885.1_ASM1407688v1

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Seq: JACGUV010000029.1 Colwellia sp. MB3u-22 NODE_779480_length_1374_cov_1.7, whole genome shotgun sequence (1374 bp)
Overview 1 RT 1: 134-1211 bp Neighborhood of RT #1 [134, 1372] RVT-GII GIIM Feature: gene Location: 134-1372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 320-941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 320-941 bp Feature: domain Description: GIIM Note: maturase Location: 989-1211 bp Feature: domain Description: GIIM Note: maturase Location: 989-1 21 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACGUV010000146.1 Colwellia sp. MB3u-22 NODE_825812_length_151530_cov_24.3, whole genome shotgun sequence (151530 bp)
Overview 1 RT 1: 43606-47679 bp Neighborhood of RT #1 [43606, 47693] RVT-UG4 RVT-UG4 RVT-UG4 Beta-lactamase KOG1173 Feature: gene Location: 43606-44643 bp Feature: gene Location: 44704-44850 bp Feature: gene Location: 45027-45239 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 45033-45132 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 45033-45132 bp Feature: gene Location: 45255-45458 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 45258-45456 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 452 58-45456 bp Feature: gene Location: 45462-45680 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 45558-45675 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 45558-45675 bp Feature: gene Location: 45714-45875 bp Feature: gene Location: 46254-47693 bp Feature: domain Description: Beta-lactamase Location: 46356-47187 bp Feature: domain Description: Beta-lactamase Location: 46356-47187 bp Feature: domain Description: KOG1173 Location: 47391-47679 bp Feature: domain Description: KOG1173 Location: 47391-47679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, Beta-lactamase (pfam00144), KOG1173 (KOG1173, Anaphase-promoting complex (APC), Cdc16 subunit )

Seq: JACGUV010000164.1 Colwellia sp. MB3u-22 NODE_827738_length_185622_cov_24.2, whole genome shotgun sequence (185622 bp)
Overview 1 RT 1: 33389-40748 bp Neighborhood of RT #1 [33389, 40748] Curlin_rpt Curlin_rpt Curlin_rpt Curlin_rpt Curlin_rpt Curlin_rpt Curlin_rpt Curlin_rpt Curlin_rpt Peptidases_S8_Subtilisin_like COG4935 PKD RVT-UG4 Feature: gene Location: 33389-34843 bp Feature: domain Description: Curlin_rpt Location: 33581-33665 bp Feature: domain Description: Curlin_rpt Location: 3 3 581-3 3 665 bp Feature: domain Description: Curlin_rpt Location: 33770-33878 bp Feature: domain Description: Curlin_rpt Location: 3 3 770-3 3 878 bp Feature: domain Description: Curlin_rpt Location: 33920-34022 bp Feature: domain Description: Curlin_rpt Location: 3 3 920-3 4022 bp Feature: domain Description: Curlin_rpt Location: 34127-34175 bp Feature: domain Description: Curlin_rpt Location: 3 4127-3 4175 bp Feature: domain Description: Curlin_rpt Location: 34202-34277 bp Feature: domain Description: Curlin_rpt Location: 3 4202-3 4277 bp Feature: domain Description: Curlin_rpt Location: 34397-34481 bp Feature: domain Description: Curlin_rpt Location: 3 43 97-3 4481 bp Feature: domain Description: Curlin_rpt Location: 34490-34538 bp Feature: domain Description: Curlin_rpt Location: 3 4490-3 453 8 bp Feature: domain Description: Curlin_rpt Location: 34565-34661 bp Feature: domain Description: Curlin_rpt Location: 3 4565-3 4661 bp Feature: domain Description: Curlin_rpt Location: 34793-34838 bp Feature: domain Description: Curlin_rpt Location: 3 4793 -3 483 8 bp Feature: gene Location: 35587-38091 bp Feature: domain Description: Peptidases_S8_Subtilisin_like Location: 36067-36847 bp Feature: domain Description: Peptidases_S8_Subtilisin_like Location: 3 6067-3 6847 bp Feature: domain Description: COG4935 Location: 37255-37588 bp Feature: domain Description: COG493 5 Location: 3 7255-3 7588 bp Feature: domain Description: PKD Location: 37642-37840 bp Feature: domain Description: PKD Location: 3 7642-3 7840 bp Feature: gene Location: 38685-39701 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 39024-39474 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 9024-3 9474 bp Feature: gene Location: 40177-40377 bp Feature: gene Location: 40617-40748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Curlin_rpt (pfam07012), Peptidases_S8_Subtilisin_like (cd07473), COG4935 (Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ), PKD (smart00089), RVT-UG4