myRT

myRT report for GCA_014077305.1_ASM1407730v1

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Seq: JACGVQ010000089.1 Colwellia sp. BRX8-6 NODE_103360_length_7059_cov_3.6, whole genome shotgun sequence (7059 bp)
Overview 1 RT 1: 3-3632 bp Neighborhood of RT #1 [3, 3892] COG3950 RVT-Retrons WYL Feature: gene Location: 3-506 bp Feature: domain Description: COG3950 Location: 267-417 bp Feature: domain Description: COG3950 Location: 267-41 7 bp Feature: gene Location: 499-1431 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 601-1192 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 601 -1 1 92 bp Feature: gene Location: 1787-2938 bp Feature: gene Location: 3056-3892 bp Feature: domain Description: WYL Location: 3386-3632 bp Feature: domain Description: WYL Location: 3386-3632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, WYL (pfam13280)

Seq: JACGVQ010000021.1 Colwellia sp. BRX8-6 NODE_104868_length_66898_cov_6.6, whole genome shotgun sequence (66898 bp)
Overview 1 RT 1: 41440-51161 bp Neighborhood of RT #1 [41440, 51175] COG4643 primase_Cterm RVT-UG1 HsdS RMtype1_S_StySPI-TRD2-CR2_like RMtype1_S_StySPI-TRD2-CR2_like HsdM Feature: gene Location: 41440-42330 bp Feature: domain Description: COG4643 Location: 41596-42322 bp Feature: domain Description: COG4643 Location: 41596-42 32 2 bp Feature: gene Location: 42327-43670 bp Feature: domain Description: primase_Cterm Location: 42747-43317 bp Feature: domain Description: primase_Cterm Location: 42 747-43317 bp Feature: gene Location: 44056-47835 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 44740-45229 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 44740-452 2 9 bp Feature: gene Location: 47964-49688 bp Feature: domain Description: HsdS Location: 47982-48318 bp Feature: domain Description: HsdS Location: 47982 -48318 bp Feature: domain Description: RMtype1_S_StySPI-TRD2-CR2_like Location: 48558-48786 bp Feature: domain Description: RMtype1_S_StySPI-TRD2 -CR2 _like Location: 48558-48786 bp Feature: domain Description: RMtype1_S_StySPI-TRD2-CR2_like Location: 49101-49668 bp Feature: domain Description: RMtype1_S_StySPI-TRD2 -CR2 _like Location: 49101-49668 bp Feature: gene Location: 49691-51175 bp Feature: domain Description: HsdM Location: 49697-51161 bp Feature: domain Description: HsdM Location: 49697-51161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4643 (Uncharacterized domain associated with phage/plasmid primase ), primase_Cterm (TIGR01613), RVT-UG1, HsdS (COG0732), RMtype1_S_StySPI-TRD2-CR2_like (cd17523), HsdM (COG0286)