myRT

myRT report for GCA_014077325.1_ASM1407732v1

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Seq: JACGVR010000031.1 Colwellia sp. BRX8-5 NODE_162632_length_47831_cov_8.5, whole genome shotgun sequence (47831 bp)
Overview 1 RT 1: 38817-44320 bp Neighborhood of RT #1 [38817, 44580] TIGR02646 COG3950 RVT-Retrons WYL Feature: gene Location: 38817-39482 bp Feature: domain Description: TIGR02646 Location: 38886-39321 bp Feature: domain Description: TIGR02646 Location: 38886-39321 bp Feature: gene Location: 39482-41194 bp Feature: domain Description: COG3950 Location: 39746-41126 bp Feature: domain Description: COG3950 Location: 39746-41 1 26 bp Feature: gene Location: 41187-42119 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41289-41880 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41 289-41 880 bp Feature: gene Location: 42475-43626 bp Feature: gene Location: 43744-44580 bp Feature: domain Description: WYL Location: 44074-44320 bp Feature: domain Description: WYL Location: 44074-44320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, WYL (pfam13280)

Seq: JACGVR010000010.1 Colwellia sp. BRX8-5 NODE_162700_length_134555_cov_8.7, whole genome shotgun sequence (134555 bp)
Overview 1 RT 1: 44316-54037 bp Neighborhood of RT #1 [44316, 54051] COG4643 primase_Cterm RVT-UG1 HsdS RMtype1_S_StySPI-TRD2-CR2_like RMtype1_S_StySPI-TRD2-CR2_like HsdM Feature: gene Location: 44316-45206 bp Feature: domain Description: COG4643 Location: 44472-45198 bp Feature: domain Description: COG4643 Location: 44472 -45198 bp Feature: gene Location: 45203-46546 bp Feature: domain Description: primase_Cterm Location: 45623-46193 bp Feature: domain Description: primase_Cterm Location: 4562 3-46193 bp Feature: gene Location: 46932-50711 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 47616-48105 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 47616-48105 bp Feature: gene Location: 50840-52564 bp Feature: domain Description: HsdS Location: 50858-51194 bp Feature: domain Description: HsdS Location: 50858-51194 bp Feature: domain Description: RMtype1_S_StySPI-TRD2-CR2_like Location: 51434-51662 bp Feature: domain Description: RMtype1_S_StySPI-TRD2 -CR2 _like Location: 51434-51662 bp Feature: domain Description: RMtype1_S_StySPI-TRD2-CR2_like Location: 51977-52544 bp Feature: domain Description: RMtype1_S_StySPI-TRD2 -CR2 _like Location: 51977-52 544 bp Feature: gene Location: 52567-54051 bp Feature: domain Description: HsdM Location: 52573-54037 bp Feature: domain Description: HsdM Location: 52 573-54037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4643 (Uncharacterized domain associated with phage/plasmid primase ), primase_Cterm (TIGR01613), RVT-UG1, HsdS (COG0732), RMtype1_S_StySPI-TRD2-CR2_like (cd17523), HsdM (COG0286)