myRT

myRT report for GCA_014077355.1_ASM1407735v1

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Seq: JACGVT010000080.1 Colwellia sp. BRX8-3 NODE_192584_length_6561_cov_4.4, whole genome shotgun sequence (6561 bp)
Overview 1 RT 1: 3-3085 bp Neighborhood of RT #1 [3, 3345] RVT-Retrons WYL Feature: gene Location: 3-884 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 105-696 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 05-696 bp Feature: gene Location: 1240-2391 bp Feature: gene Location: 2509-3345 bp Feature: domain Description: WYL Location: 2839-3085 bp Feature: domain Description: WYL Location: 2839-3085 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, WYL (pfam13280)

Seq: JACGVT010000003.1 Colwellia sp. BRX8-3 NODE_199622_length_225140_cov_8.2, whole genome shotgun sequence (225140 bp)
Overview 1 RT 1: 134901-144622 bp Neighborhood of RT #1 [134901, 144636] COG4643 primase_Cterm RVT-UG1 HsdS RMtype1_S_StySPI-TRD2-CR2_like RMtype1_S_StySPI-TRD2-CR2_like HsdM Feature: gene Location: 134901-135791 bp Feature: domain Description: COG4643 Location: 135057-135783 bp Feature: domain Description: COG4643 Location: 135057-135783 bp Feature: gene Location: 135788-137131 bp Feature: domain Description: primase_Cterm Location: 136208-136778 bp Feature: domain Description: primase_Cterm Location: 1362 08-136778 bp Feature: gene Location: 137517-141296 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 138201-138690 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1382 01-138690 bp Feature: gene Location: 141425-143149 bp Feature: domain Description: HsdS Location: 141443-141779 bp Feature: domain Description: HsdS Location: 141443-141779 bp Feature: domain Description: RMtype1_S_StySPI-TRD2-CR2_like Location: 142019-142247 bp Feature: domain Description: RMtype1_S_StySPI-TRD2 -CR2 _like Location: 142 019-142 2 47 bp Feature: domain Description: RMtype1_S_StySPI-TRD2-CR2_like Location: 142562-143129 bp Feature: domain Description: RMtype1_S_StySPI-TRD2 -CR2 _like Location: 142 562 -14312 9 bp Feature: gene Location: 143152-144636 bp Feature: domain Description: HsdM Location: 143158-144622 bp Feature: domain Description: HsdM Location: 143158-14462 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4643 (Uncharacterized domain associated with phage/plasmid primase ), primase_Cterm (TIGR01613), RVT-UG1, HsdS (COG0732), RMtype1_S_StySPI-TRD2-CR2_like (cd17523), HsdM (COG0286)