myRT

myRT report for GCA_014077465.1_ASM1407746v1

Download annotations/find similar RTs

Seq: JACGVZ010000003.1 Colwellia sp. BRX10-4 NODE_167808_length_267519_cov_9.6, whole genome shotgun sequence (267519 bp)
Overview 1 RT 1: 3560-7716 bp Neighborhood of RT #1 [3560, 7716] RVT-UG4 Mob_Pre Feature: gene Location: 3560-3781 bp Feature: gene Location: 4305-4520 bp Feature: gene Location: 4957-5967 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5296-5746 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5296-5746 bp Feature: gene Location: 6473-7288 bp Feature: domain Description: Mob_Pre Location: 6524-7100 bp Feature: domain Description: Mob_Pre Location: 6524-71 00 bp Feature: gene Location: 7408-7716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, Mob_Pre (pfam01076)

Seq: JACGVZ010000016.1 Colwellia sp. BRX10-4 NODE_170674_length_105051_cov_9.8, whole genome shotgun sequence (105051 bp)
Overview 1 RT 1: 91119-97173 bp Neighborhood of RT #1 [91119, 97187] PEP-CTERM RVT-UG4 recQ AraC Feature: gene Location: 91119-91304 bp Feature: gene Location: 91936-92511 bp Feature: domain Description: PEP-CTERM Location: 92431-92494 bp Feature: domain Description: PEP-CTERM Location: 92 431-92 494 bp Feature: gene Location: 92911-93504 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 93259-93502 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 932 59-93502 bp Feature: gene Location: 94158-95954 bp Feature: domain Description: recQ Location: 94179-95946 bp Feature: domain Description: recQ Location: 94179-95946 bp Feature: gene Location: 96264-97187 bp Feature: domain Description: AraC Location: 96867-97173 bp Feature: domain Description: AraC Location: 96867-97173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PEP-CTERM, RVT-UG4, recQ (TIGR01389), AraC (COG2207)

Seq: JACGVZ010000005.1 Colwellia sp. BRX10-4 NODE_170790_length_176174_cov_10.0, whole genome shotgun sequence (176174 bp)
Overview 1 RT 1: 101001-108323 bp Neighborhood of RT #1 [101001, 108328] COG3666 DDE_Tnp_1_6 PEP-CTERM RVT-UG4 PRK10919 Feature: gene Location: 101001-102437 bp Feature: domain Description: COG3666 Location: 101013-101469 bp Feature: domain Description: COG3 666 Location: 101013 -101469 bp Feature: domain Description: DDE_Tnp_1_6 Location: 102033-102387 bp Feature: domain Description: DDE_Tnp_1_6 Location: 10203 3 -1023 87 bp Feature: gene Location: 103303-104208 bp Feature: domain Description: PEP-CTERM Location: 104128-104191 bp Feature: domain Description: PEP-CTERM Location: 104128-104191 bp Feature: gene Location: 104272-105192 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 104611-105061 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 104611-105061 bp Feature: gene Location: 105708-106085 bp Feature: gene Location: 106307-108328 bp Feature: domain Description: PRK10919 Location: 106310-108323 bp Feature: domain Description: PRK10919 Location: 1063 10-1083 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751), PEP-CTERM, RVT-UG4, PRK10919 (ATP-dependent DNA helicase Rep; Provisional)

Seq: JACGVZ010000001.1 Colwellia sp. BRX10-4 NODE_170796_length_537911_cov_9.8, whole genome shotgun sequence (537911 bp)
Overview 1 RT 1: 113921-117769 bp Neighborhood of RT #1 [113921, 117774] RVT-UG4 NnrS Feature: gene Location: 113921-114130 bp Feature: gene Location: 114123-114524 bp Feature: gene Location: 114856-115872 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 115195-115645 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 115195-11564 5 bp Feature: gene Location: 116086-116283 bp Feature: gene Location: 117562-117774 bp Feature: domain Description: NnrS Location: 117574-117769 bp Feature: domain Description: NnrS Location: 117574 -117769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, NnrS (pfam05940)