myRT

myRT report for GCA_014103505.1_ASM1410350v1

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Seq: JABXPX010000001.1 Klebsiella sp. RHBSTW-00465 RHBSTW-00465_1, whole genome shotgun sequence (6268076 bp)
Overview 1 RT 1: 1009972-1017223 bp 2 RT 2: 2601168-2604826 bp Neighborhood of RT #1 [1009972, 1017258] DDE_Tnp_IS66 RVT-GII GIIM InsE TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Neighborhood of RT #2 [2601168, 2604826] UvrA RVT-GII GIIM PHA02517 Feature: gene Location: 1009972-1010346 bp Feature: gene Location: 1010424-1010906 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1010430-1010820 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 01 0430-1 01 0820 bp Feature: gene Location: 1010982-1011767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1010985-1011393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 0985-1 01 1 393 bp Feature: domain Description: GIIM Note: maturase Location: 1011459-1011669 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 1 459-1 01 1 669 bp Feature: gene Location: 1011916-1012320 bp Feature: domain Description: InsE Location: 1011937-1012300 bp Feature: domain Description: InsE Location: 1 01 1 937-1 01 2300 bp Feature: gene Location: 1012371-1012667 bp Feature: domain Description: TnpB_IS66 Location: 1012374-1012635 bp Feature: domain Description: TnpB_IS66 Location: 1 01 2374-1 01 2635 bp Feature: gene Location: 1012698-1014287 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1012857-1013067 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 01 2857-1 01 3067 bp Feature: domain Description: zf-IS66 Location: 1013088-1013220 bp Feature: domain Description: zf-IS66 Location: 1 01 3088-1 01 3220 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1013265-1014132 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 01 3265-1 01 41 32 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1014156-1014264 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 01 41 56-1 01 4264 bp Feature: gene Location: 1014314-1014889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1014686-1014866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 4686-1 01 4866 bp Feature: gene Location: 1014807-1015262 bp Feature: gene Location: 1015645-1017258 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1015834-1016041 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 01 5834-1 01 6041 bp Feature: domain Description: zf-IS66 Location: 1016071-1016197 bp Feature: domain Description: zf-IS66 Location: 1 01 6071 -1 01 61 97 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1016242-1017094 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 01 6242-1 01 7094 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1017115-1017223 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 01 71 1 5-1 01 7223 bp Feature: gene Location: 2601168-2601593 bp Feature: domain Description: UvrA Location: 2601219-2601561 bp Feature: domain Description: UvrA Location: 2601 21 9-2601 561 bp Feature: gene Location: 2601613-2602242 bp Feature: gene Location: 2602536-2604059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2602809-2603541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2602809-2603541 bp Feature: domain Description: GIIM Note: maturase Location: 2603616-2603814 bp Feature: domain Description: GIIM Note: maturase Location: 260361 6-260381 4 bp Feature: gene Location: 2604194-2604628 bp Feature: domain Description: PHA02517 Location: 2604197-2604608 bp Feature: domain Description: PHA0251 7 Location: 26041 97-2604608 bp Feature: gene Location: 2604635-2604826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), InsE (COG2963), TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66_C (pfam13817), UvrA (COG0178), PHA02517 (putative transposase OrfB; Reviewed)