myRT

myRT report for GCA_014103555.1_ASM1410355v1

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Seq: JABXQE010000001.1 Enterobacter sp. RHBSTW-00340 RHBSTW-00340_1, whole genome shotgun sequence (2261197 bp)
Overview 1 RT 1: 1870305-1876900 bp Neighborhood of RT #1 [1870305, 1876914] COG5519 DUF927 RVT-UG17 Ogr_Delta COG4643 COG5519 Feature: gene Location: 1870305-1870478 bp Feature: domain Description: COG5519 Location: 1870311-1870467 bp Feature: domain Description: COG551 9 Location: 1 87031 1 -1 870467 bp Feature: gene Location: 1870675-1870845 bp Feature: domain Description: DUF927 Location: 1870738-1870837 bp Feature: domain Description: DUF927 Location: 1 870738-1 870837 bp Feature: gene Location: 1871229-1872566 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1871457-1872060 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 871 457-1 872060 bp Feature: gene Location: 1873678-1873950 bp Feature: domain Description: Ogr_Delta Location: 1873699-1873837 bp Feature: domain Description: Ogr_Delta Location: 1 873699-1 873837 bp Feature: gene Location: 1874227-1876914 bp Feature: domain Description: COG4643 Location: 1874239-1875175 bp Feature: domain Description: COG4643 Location: 1 874239-1 8751 75 bp Feature: domain Description: COG5519 Location: 1875232-1876900 bp Feature: domain Description: COG551 9 Location: 1 875232-1 876900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5519 (Uncharcterized protein, DUF927 family ), DUF927 (pfam06048), RVT-UG17, Ogr_Delta (pfam04606), COG4643 (Uncharacterized domain associated with phage/plasmid primase )

Seq: JABXQE010000002.1 Enterobacter sp. RHBSTW-00340 RHBSTW-00340_2, whole genome shotgun sequence (1164773 bp)
Overview 1 RT 1: 177-4530 bp Neighborhood of RT #1 [177, 4541] PHA02517 RVT-GII GIIM PHA02517 HTH_38 Tra8 Feature: gene Location: 177-593 bp Feature: domain Description: PHA02517 Location: 180-585 bp Feature: domain Description: PHA02 517 Location: 180-585 bp Feature: gene Location: 716-2239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 989-1721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 989-172 1 bp Feature: domain Description: GIIM Note: maturase Location: 1796-1994 bp Feature: domain Description: GIIM Note: maturase Location: 1796-1994 bp Feature: gene Location: 2831-3256 bp Feature: domain Description: PHA02517 Location: 2852-3191 bp Feature: domain Description: PHA02 517 Location: 2 852 -3191 bp Feature: gene Location: 3390-4541 bp Feature: domain Description: HTH_38 Location: 3399-3513 bp Feature: domain Description: HTH_38 Location: 3399-3513 bp Feature: domain Description: Tra8 Location: 3549-4530 bp Feature: domain Description: Tra8 Location: 3549-4530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_38 (pfam13936), Tra8 (COG2826)

Seq: JABXQE010000003.1 Enterobacter sp. RHBSTW-00340 RHBSTW-00340_3, whole genome shotgun sequence (824814 bp)
Overview 1 RT 1: 562848-566607 bp Neighborhood of RT #1 [562848, 566672] IS5 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 562848-563534 bp Feature: domain Description: IS5 Location: 562854-563520 bp Feature: domain Description: IS5 Location: 562854-563 520 bp Feature: gene Location: 563584-563967 bp Feature: domain Description: PHA02517 Location: 563587-563962 bp Feature: domain Description: PHA02517 Location: 563 587-563 962 bp Feature: gene Location: 564132-565655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 564405-565137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 564405-56513 7 bp Feature: domain Description: GIIM Note: maturase Location: 565212-565410 bp Feature: domain Description: GIIM Note: maturase Location: 565212-565410 bp Feature: gene Location: 565609-566034 bp Feature: gene Location: 566247-566672 bp Feature: domain Description: PHA02517 Location: 566268-566607 bp Feature: domain Description: PHA02517 Location: 566268-566607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JABXQE010000005.1 Enterobacter sp. RHBSTW-00340 RHBSTW-00340_5, whole genome shotgun sequence (138329 bp)
Overview 1 RT 1: 95280-101487 bp Neighborhood of RT #1 [95280, 101498] bcsA PHA02517 RVT-GII GIIM HTH_38 Tra8 Feature: gene Location: 95280-97169 bp Feature: domain Description: bcsA Location: 95325-97161 bp Feature: domain Description: bcsA Location: 95325-97161 bp Feature: gene Location: 97171-97551 bp Feature: domain Description: PHA02517 Location: 97174-97543 bp Feature: domain Description: PHA02517 Location: 97174 -9754 3 bp Feature: gene Location: 97728-99251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98001-98733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98001-98733 bp Feature: domain Description: GIIM Note: maturase Location: 98808-99006 bp Feature: domain Description: GIIM Note: maturase Location: 98808-99006 bp Feature: gene Location: 99882-100202 bp Feature: gene Location: 100347-101498 bp Feature: domain Description: HTH_38 Location: 100356-100470 bp Feature: domain Description: HTH_38 Location: 100356-1004 70 bp Feature: domain Description: Tra8 Location: 100506-101487 bp Feature: domain Description: Tra8 Location: 100506-1014 87 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT bcsA (PRK11498), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_38 (pfam13936), Tra8 (COG2826)