myRT

myRT report for GCA_014103665.1_ASM1410366v1

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Seq: JABXQN010000002.1 Escherichia marmotae strain RHBSTW-00265 plasmid pRHBSTW-00265_2, whole genome shotgun sequence (108172 bp)
Overview 1 RT 1: 28498-32286 bp Neighborhood of RT #1 [28498, 32286] PRK15211 RVT-UG4 RVT-UG4 Feature: gene Location: 28498-29193 bp Feature: domain Description: PRK15211 Location: 28504-29185 bp Feature: domain Description: PRK1 521 1 Location: 28504-291 85 bp Feature: gene Location: 29200-29781 bp Feature: gene Location: 29778-30374 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30120-30354 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 301 20-30354 bp Feature: gene Location: 30388-30756 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30391-30562 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 30391 -30562 bp Feature: gene Location: 30758-31609 bp Feature: gene Location: 31888-32286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15211 (fimbrial chaperone), RVT-UG4

Seq: JABXQN010000001.1 Escherichia marmotae strain RHBSTW-00265 RHBSTW-00265_1, whole genome shotgun sequence (4579250 bp)
Overview 1 RT 1: 2143510-2145738 bp 2 RT 2: 3242926-3248728 bp Neighborhood of RT #1 [2143510, 2145992] PHA02517 RVT-GII group_II_RT_mat Neighborhood of RT #2 [3242926, 3248728] ribA aconitase_1 RVT-GII GIIM Feature: gene Location: 2143510-2143791 bp Feature: domain Description: PHA02517 Location: 2143534-2143780 bp Feature: domain Description: PHA02 517 Location: 2 143534-2 143780 bp Feature: gene Location: 2143806-2144303 bp Feature: gene Location: 2144499-2145137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2144772-2145090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 144772 -2 145090 bp Feature: gene Location: 2145161-2145319 bp Feature: gene Location: 2145420-2145992 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2145426-2145738 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2 14542 6-2 145738 bp Feature: gene Location: 3242926-3243579 bp Feature: domain Description: ribA Location: 3243001-3243571 bp Feature: domain Description: ribA Location: 32 43001-32 43571 bp Feature: gene Location: 3243643-3246318 bp Feature: domain Description: aconitase_1 Location: 3243697-3246313 bp Feature: domain Description: aconitase_1 Location: 32 43697-32 46313 bp Feature: gene Location: 3246546-3247898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3246867-3247485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 46867-32 47485 bp Feature: domain Description: GIIM Note: maturase Location: 3247533-3247752 bp Feature: domain Description: GIIM Note: maturase Location: 32 47533-32 47752 bp Feature: gene Location: 3247881-3248477 bp Feature: gene Location: 3248558-3248728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, group_II_RT_mat (TIGR04416), ribA (TIGR00505), aconitase_1 (TIGR01341), GIIM (pfam08388)