myRT

myRT report for GCA_014103775.1_ASM1410377v1

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Seq: JABXQT010000001.1 Enterobacter asburiae strain RHBSTW-00209 RHBSTW-00209_1, whole genome shotgun sequence (5081149 bp)
Overview 1 RT 1: 239063-243708 bp 2 RT 2: 581689-585940 bp 3 RT 3: 1142474-1145772 bp 4 RT 4: 2477611-2482788 bp 5 RT 5: 2921972-2926168 bp 6 RT 6: 3556742-3560784 bp 7 RT 7: 4368685-4374063 bp 8 RT 8: 4382873-4387365 bp Neighborhood of RT #1 [239063, 243708] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [581689, 585951] RVT-GII GIIM PHA02517 HTH_38 Tra8 Neighborhood of RT #3 [1142474, 1145783] RVT-GII GIIM PHA02517 InsE Neighborhood of RT #4 [2477611, 2483090] InsE PHA02517 RVT-GII GIIM Haemagg_act FHA_bHelix FHA_bHelix Neighborhood of RT #5 [2921972, 2926179] RVT-GII GIIM PHA02517 HTH_38 Tra8 Neighborhood of RT #6 [3556742, 3560784] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #7 [4368685, 4374893] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C PHA02517 RVT-GII GIIM PHA02517 DUF262 Neighborhood of RT #8 [4382873, 4387376] PHA02517 RVT-GII GIIM PHA02517 HTH_38 Tra8 Feature: gene Location: 239063-239365 bp Feature: domain Description: InsE Location: 239072-239354 bp Feature: domain Description: InsE Location: 239072-239354 bp Feature: gene Location: 239392-239817 bp Feature: domain Description: PHA02517 Location: 239416-239752 bp Feature: domain Description: PHA0251 7 Location: 23941 6-239752 bp Feature: gene Location: 240409-241932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240682-241414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240682-241 41 4 bp Feature: domain Description: GIIM Note: maturase Location: 241489-241687 bp Feature: domain Description: GIIM Note: maturase Location: 241 489-241 687 bp Feature: gene Location: 242097-242501 bp Feature: domain Description: PHA02517 Location: 242100-242490 bp Feature: domain Description: PHA0251 7 Location: 2421 00-242490 bp Feature: gene Location: 243307-243708 bp Feature: gene Location: 581689-581832 bp Feature: gene Location: 581857-582042 bp Feature: gene Location: 582129-583652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 582402-583134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 582402-5831 34 bp Feature: domain Description: GIIM Note: maturase Location: 583209-583407 bp Feature: domain Description: GIIM Note: maturase Location: 583209-583407 bp Feature: gene Location: 584244-584669 bp Feature: domain Description: PHA02517 Location: 584268-584604 bp Feature: domain Description: PHA0251 7 Location: 584268-584604 bp Feature: gene Location: 584800-585951 bp Feature: domain Description: HTH_38 Location: 584809-584923 bp Feature: domain Description: HTH_38 Location: 584809-584923 bp Feature: domain Description: Tra8 Location: 584959-585940 bp Feature: domain Description: Tra8 Location: 584959-585940 bp Feature: gene Location: 1142474-1142617 bp Feature: gene Location: 1142642-1142827 bp Feature: gene Location: 1142914-1144437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1143187-1143919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 431 87-1 1 4391 9 bp Feature: domain Description: GIIM Note: maturase Location: 1143994-1144192 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 43994-1 1 441 92 bp Feature: gene Location: 1145029-1145454 bp Feature: domain Description: PHA02517 Location: 1145053-1145389 bp Feature: domain Description: PHA0251 7 Location: 1 1 45053-1 1 45389 bp Feature: gene Location: 1145481-1145783 bp Feature: domain Description: InsE Location: 1145490-1145772 bp Feature: domain Description: InsE Location: 1 1 45490-1 1 45772 bp Feature: gene Location: 2477611-2477913 bp Feature: domain Description: InsE Location: 2477620-2477902 bp Feature: domain Description: InsE Location: 2477620-2477902 bp Feature: gene Location: 2477940-2478365 bp Feature: domain Description: PHA02517 Location: 2477964-2478300 bp Feature: domain Description: PHA0251 7 Location: 2477964-2478300 bp Feature: gene Location: 2478957-2480480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2479230-2479962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2479230-2479962 bp Feature: domain Description: GIIM Note: maturase Location: 2480037-2480235 bp Feature: domain Description: GIIM Note: maturase Location: 2480037-2480235 bp Feature: gene Location: 2480567-2480752 bp Feature: gene Location: 2481042-2483090 bp Feature: domain Description: Haemagg_act Location: 2481186-2481558 bp Feature: domain Description: Haemagg_act Location: 2481 1 86-2481 558 bp Feature: domain Description: FHA_bHelix Location: 2481885-2482248 bp Feature: domain Description: FHA_bHelix Location: 2481 885-2482248 bp Feature: domain Description: FHA_bHelix Location: 2482263-2482788 bp Feature: domain Description: FHA_bHelix Location: 2482263-2482788 bp Feature: gene Location: 2921972-2922115 bp Feature: gene Location: 2922140-2922325 bp Feature: gene Location: 2922412-2923935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2922685-2923417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2922685-292341 7 bp Feature: domain Description: GIIM Note: maturase Location: 2923492-2923690 bp Feature: domain Description: GIIM Note: maturase Location: 2923492-2923690 bp Feature: gene Location: 2924527-2924952 bp Feature: domain Description: PHA02517 Location: 2924551-2924887 bp Feature: domain Description: PHA0251 7 Location: 2924551 -2924887 bp Feature: gene Location: 2925028-2926179 bp Feature: domain Description: HTH_38 Location: 2925037-2925151 bp Feature: domain Description: HTH_38 Location: 2925037-29251 51 bp Feature: domain Description: Tra8 Location: 2925187-2926168 bp Feature: domain Description: Tra8 Location: 29251 87-29261 68 bp Feature: gene Location: 3556742-3557044 bp Feature: domain Description: InsE Location: 3556751-3557033 bp Feature: domain Description: InsE Location: 3556751 -3557033 bp Feature: gene Location: 3557071-3557496 bp Feature: domain Description: PHA02517 Location: 3557095-3557431 bp Feature: domain Description: PHA0251 7 Location: 3557095-3557431 bp Feature: gene Location: 3558088-3559611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3558361-3559093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3558361 -3559093 bp Feature: domain Description: GIIM Note: maturase Location: 3559168-3559366 bp Feature: domain Description: GIIM Note: maturase Location: 35591 68-3559366 bp Feature: gene Location: 3559776-3560180 bp Feature: domain Description: PHA02517 Location: 3559779-3560169 bp Feature: domain Description: PHA0251 7 Location: 3559779-35601 69 bp Feature: gene Location: 3560107-3560784 bp Feature: gene Location: 4368685-4370220 bp Feature: domain Description: LZ_Tnp_IS66 Location: 4368802-4369015 bp Feature: domain Description: LZ_Tnp_IS66 Location: 4368802-436901 5 bp Feature: domain Description: zf-IS66 Location: 4369036-4369168 bp Feature: domain Description: zf-IS66 Location: 4369036-43691 68 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4369213-4370068 bp Feature: domain Description: DDE_Tnp_IS66 Location: 436921 3-4370068 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4370089-4370200 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4370089-4370200 bp Feature: gene Location: 4370308-4370733 bp Feature: domain Description: PHA02517 Location: 4370329-4370668 bp Feature: domain Description: PHA0251 7 Location: 4370329-4370668 bp Feature: gene Location: 4371325-4372848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4371598-4372330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4371 598-4372330 bp Feature: domain Description: GIIM Note: maturase Location: 4372405-4372603 bp Feature: domain Description: GIIM Note: maturase Location: 4372405-4372603 bp Feature: gene Location: 4373013-4373417 bp Feature: domain Description: PHA02517 Location: 4373016-4373406 bp Feature: domain Description: PHA0251 7 Location: 437301 6-4373406 bp Feature: gene Location: 4373439-4374893 bp Feature: domain Description: DUF262 Location: 4373502-4374063 bp Feature: domain Description: DUF262 Location: 4373502-4374063 bp Feature: gene Location: 4382873-4383043 bp Feature: gene Location: 4383178-4383486 bp Feature: domain Description: PHA02517 Location: 4383181-4383451 bp Feature: domain Description: PHA0251 7 Location: 43831 81 -4383451 bp Feature: gene Location: 4383609-4385132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4383882-4384614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4383882-438461 4 bp Feature: domain Description: GIIM Note: maturase Location: 4384689-4384887 bp Feature: domain Description: GIIM Note: maturase Location: 4384689-4384887 bp Feature: gene Location: 4385724-4386149 bp Feature: domain Description: PHA02517 Location: 4385748-4386084 bp Feature: domain Description: PHA0251 7 Location: 4385748-4386084 bp Feature: gene Location: 4386225-4387376 bp Feature: domain Description: HTH_38 Location: 4386234-4386348 bp Feature: domain Description: HTH_38 Location: 4386234-4386348 bp Feature: domain Description: Tra8 Location: 4386384-4387365 bp Feature: domain Description: Tra8 Location: 4386384-4387365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_38 (pfam13936), Tra8 (COG2826), Haemagg_act (smart00912), FHA_bHelix (sd00046), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005)
DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), DUF262 (pfam03235)