myRT

myRT report for GCA_014104615.1_ASM1410461v1

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Seq: JABXSK010000012.1 Escherichia fergusonii strain RHB37-C02 RHB37-C02_12, whole genome shotgun sequence (143037 bp)
Overview 1 RT 1: 75866-79746 bp Neighborhood of RT #1 [75866, 79751] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 75866-76324 bp Feature: domain Description: dut Location: 75872-76319 bp Feature: domain Description: dut Location: 75872-7631 9 bp Feature: gene Location: 76431-77027 bp Feature: domain Description: slmA Location: 76437-77013 bp Feature: domain Description: slmA Location: 76437-7701 3 bp Feature: gene Location: 77071-78030 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 77206-77755 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 77206-77755 bp Feature: gene Location: 78328-78984 bp Feature: domain Description: pyrE Location: 78346-78979 bp Feature: domain Description: pyrE Location: 78346-78979 bp Feature: gene Location: 79035-79751 bp Feature: domain Description: rph Location: 79038-79746 bp Feature: domain Description: rph Location: 79038-79746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: JABXSK010000019.1 Escherichia fergusonii strain RHB37-C02 RHB37-C02_19, whole genome shotgun sequence (82611 bp)
Overview 1 RT 1: 5235-12013 bp Neighborhood of RT #1 [5235, 12018] RVT_N RVT-GII GIIM HNHc RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 5235-5426 bp Feature: gene Location: 5497-5631 bp Feature: gene Location: 5704-7371 bp Feature: RT Description: RVT_N Location: 5752-5989 bp Feature: RT Description: RVT_N Location: 5752 -5989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6040-6682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6040-6682 bp Feature: domain Description: GIIM Note: maturase Location: 6733-6967 bp Feature: domain Description: GIIM Note: maturase Location: 6733-6967 bp Feature: domain Description: HNHc Note: nucleases Location: 7177-7336 bp Feature: domain Description: HNHc Note: nucleases Location: 7177-7336 bp Feature: gene Location: 7387-7524 bp Feature: gene Location: 7651-7833 bp Feature: gene Location: 7945-8628 bp Feature: gene Location: 8847-9056 bp Feature: gene Location: 9191-11092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9458-10289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9458-102 89 bp Feature: domain Description: Intron_maturas2 Location: 10403-10661 bp Feature: domain Description: Intron_maturas2 Location: 10403-10661 bp Feature: domain Description: HNHc Note: nucleases Location: 10835-10997 bp Feature: domain Description: HNHc Note: nucleases Location: 10835-10997 bp Feature: gene Location: 11287-11727 bp Feature: domain Description: PRK13732 Location: 11293-11725 bp Feature: domain Description: PRK13732 Location: 112 93-1172 5 bp Feature: gene Location: 11785-12018 bp Feature: domain Description: DUF905 Location: 11815-12013 bp Feature: domain Description: DUF905 Location: 11815-12 013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006), Intron_maturas2 (pfam01348)