myRT

myRT report for GCA_014104895.1_ASM1410489v1

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Seq: JABXSZ010000001.1 Escherichia fergusonii strain RHB30-C06 RHB30-C06_1, whole genome shotgun sequence (4530848 bp)
Overview 1 RT 1: 894138-898456 bp 2 RT 2: 917952-921832 bp 3 RT 3: 2570382-2576111 bp Neighborhood of RT #1 [894138, 898473] Psu RVT-UG17 SLATT_5 PRK09692 Neighborhood of RT #2 [917952, 921837] rph pyrE RVT-Retrons slmA dut Neighborhood of RT #3 [2570382, 2576119] Phage_GPA RVT-AbiP2 Q Feature: gene Location: 894138-894710 bp Feature: domain Description: Psu Location: 894156-894693 bp Feature: domain Description: Psu Location: 8941 56-894693 bp Feature: gene Location: 894763-894912 bp Feature: gene Location: 895033-896442 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 895270-895882 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 895270-895882 bp Feature: gene Location: 896541-897278 bp Feature: domain Description: SLATT_5 Location: 896640-897246 bp Feature: domain Description: SLATT_5 Location: 896640-897246 bp Feature: gene Location: 897295-898473 bp Feature: domain Description: PRK09692 Location: 897304-898456 bp Feature: domain Description: PRK09692 Location: 897304-898456 bp Feature: gene Location: 917952-918668 bp Feature: domain Description: rph Location: 917955-918663 bp Feature: domain Description: rph Location: 91 7955-91 8663 bp Feature: gene Location: 918719-919375 bp Feature: domain Description: pyrE Location: 918737-919370 bp Feature: domain Description: pyrE Location: 91 8737-91 9370 bp Feature: gene Location: 919673-920632 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 919808-920354 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 91 9808-920354 bp Feature: gene Location: 920676-921272 bp Feature: domain Description: slmA Location: 920682-921258 bp Feature: domain Description: slmA Location: 920682-921 258 bp Feature: gene Location: 921379-921837 bp Feature: domain Description: dut Location: 921385-921832 bp Feature: domain Description: dut Location: 921 385-921 832 bp Feature: gene Location: 2570382-2572658 bp Feature: domain Description: Phage_GPA Location: 2570781-2571768 bp Feature: domain Description: Phage_GPA Location: 2570781 -2571 768 bp Feature: gene Location: 2572720-2572980 bp Feature: gene Location: 2573146-2574690 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2573563-2574016 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2573563-257401 6 bp Feature: gene Location: 2574885-2575046 bp Feature: gene Location: 2575085-2576119 bp Feature: domain Description: Q Location: 2575088-2576111 bp Feature: domain Description: Q Location: 2575088-25761 1 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG17, SLATT_5 (pfam18160), PRK09692 (Integrase; provisional), rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576), Phage_GPA (pfam05840)
RVT-AbiP2, Q (PHA02536)